Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0321
         (841 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773...    29   3.5  

>03_06_0344 -
           33276366-33276548,33277044-33277169,33277254-33277322,
           33277401-33277505,33277595-33277633,33277717-33278016,
           33278093-33278182,33278271-33278312,33278433-33278516,
           33278762-33278947,33279218-33279403,33279663-33280025
          Length = 590

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 16/68 (23%), Positives = 31/68 (45%)
 Frame = +2

Query: 260 HCIYILIHEAKTLYPFLRKLRGRRSMIFSTLIENIEKKCKTLIFFKNNA*KIH*IDKENI 439
           +C+         LY FL+K + ++ M+F +   +++   + L F +     IH   K+  
Sbjct: 327 YCVIDSARRFLVLYAFLKKKQNKKVMVFFSSCNSVKFHAELLNFLQIECSDIHGKQKQQK 386

Query: 440 THTTYHVF 463
             TT+  F
Sbjct: 387 RTTTFFNF 394


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,802,400
Number of Sequences: 37544
Number of extensions: 319123
Number of successful extensions: 512
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)