Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0321
         (841 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93785-5|CAB07861.3|  321|Caenorhabditis elegans Hypothetical pr...    33   0.25 
Z79754-1|CAB02090.1|  457|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AF026213-4|AAB71305.2|  458|Caenorhabditis elegans Cell death ab...    28   9.5  

>Z93785-5|CAB07861.3|  321|Caenorhabditis elegans Hypothetical
           protein W09D10.5 protein.
          Length = 321

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 18/60 (30%), Positives = 25/60 (41%)
 Frame = +2

Query: 308 LRKLRGRRSMIFSTLIENIEKKCKTLIFFKNNA*KIH*IDKENITHTTYHVFDAHTHAYY 487
           L K   +   I S + +   K C+  IFF NN        K    +T YHV  +  H Y+
Sbjct: 70  LHKATHKPENIISAITDGYAKLCQETIFFTNNQKLFDKFQKFQNNYTMYHVDSSLNHFYW 129


>Z79754-1|CAB02090.1|  457|Caenorhabditis elegans Hypothetical
           protein F25H2.1 protein.
          Length = 457

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 372 FFSIFSISVENIILLRPRNFRKKGYKVFASCINI 271
           FF +  + ++ I   +PR FRK+ YKV    IN+
Sbjct: 225 FFQLKYLPIKRITHCQPRRFRKQLYKVIIFRINV 258


>AF026213-4|AAB71305.2|  458|Caenorhabditis elegans Cell death
           abnormality protein 8 protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 447 LRTMYLTHTRMHTIYCQAFVLDVCCQIENRLNII 548
           L +++L  T +H I+ QA  +D C  IE  L +I
Sbjct: 292 LISVHLLVTLVHVIFLQAIHIDACTHIEKLLLLI 325


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,638,257
Number of Sequences: 27780
Number of extensions: 366044
Number of successful extensions: 685
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)