Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0320
(894 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase comp... 270 1e-73
SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptida... 111 1e-25
SPCC613.10 |qcr2||ubiquinol-cytochrome-c reductase complex core ... 65 1e-11
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 51 3e-07
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 49 1e-06
SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces pom... 37 0.003
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 29 1.2
SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr 1|... 28 1.6
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 28 2.1
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 27 2.7
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 27 3.6
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 26 6.3
SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces po... 26 8.3
>SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase complex
beta subunit Qcr1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 457
Score = 270 bits (663), Expect = 1e-73
Identities = 138/248 (55%), Positives = 173/248 (69%), Gaps = 6/248 (2%)
Frame = +3
Query: 138 ALVNVPPTKLTVLDNGLRIATEDSG-AATATVGLWIDAGSRYETSKNNGVAHFLEHMAFK 314
A +P T+ T L NGL +ATE A TATV + +DAGSR ET+KNNG AHFLEH+AFK
Sbjct: 15 ATTALPKTETTTLKNGLTVATEHHPYAQTATVLVGVDAGSRAETAKNNGAAHFLEHLAFK 74
Query: 315 GTSKRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEP 494
GT RSQ LEL EN GAHLNAYTSREQTV+YA N VP AV +LADI+ NSS++
Sbjct: 75 GTKNRSQKALELEFENTGAHLNAYTSREQTVYYAHAFKNAVPNAVAVLADILTNSSISAS 134
Query: 495 EIERERGVILREMQDVESNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSY 674
+ERER VILRE ++V+ EVVFDHLHATA+QG PLG+TILGP +NI+ +++ DL Y
Sbjct: 135 AVERERQVILREQEEVDKMADEVVFDHLHATAYQGHPLGRTILGPKENIESLTREDLLQY 194
Query: 675 IRNHYQPGRIVLSGAGGVEHERLVDLASKHFSGLKNSTCDVEL-----TPCRYTGSEIRV 839
I+++Y+ R+++S AG + HE LV LA K+F L+ S + L R+ GSEIR
Sbjct: 195 IKDNYRSDRMIISSAGSISHEELVKLAEKYFGHLEPSAEQLSLGAPRGLKPRFVGSEIRA 254
Query: 840 RDDSMPLA 863
RDD P A
Sbjct: 255 RDDDSPTA 262
>SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptidase
complex alpha subunit Mas2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 494
Score = 111 bits (268), Expect = 1e-25
Identities = 59/229 (25%), Positives = 117/229 (51%), Gaps = 1/229 (0%)
Frame = +3
Query: 174 LDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLELL 353
L NG+ + + +G+++ AGSRYET K +GV+HF++ +AF+ T + +++
Sbjct: 51 LKNGVTYVCDPRPGHFSGLGVYVKAGSRYETKKFSGVSHFMDRLAFQATERTPVGEMKAK 110
Query: 354 VENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREM 533
+EN+G + TSRE ++ A +DV ++LA+ + + E ++ R I+ E
Sbjct: 111 LENLGGNYMCSTSRESMIYQAAVFNDDVKSMSKLLAETVLAPKIQEDDLVHYRDSIIYEN 170
Query: 534 QDVESNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLS 713
++ + ++ + H TAFQ LG +L + I+ ++ Y++ Y+P + L+
Sbjct: 171 SELWTKPDALLGEFAHVTAFQNNTLGNCLLCTPDKVNGITATSIREYLKYFYRPEHLTLA 230
Query: 714 GAGGVEHERLVDLASKHFSGLKNSTC-DVELTPCRYTGSEIRVRDDSMP 857
A G+ E ++ + + L +S+ +E P YTG + ++ P
Sbjct: 231 YA-GIPQEIAKEITKELYGHLPSSSLPPLEAIPSHYTGGFMGIKKSEAP 278
>SPCC613.10 |qcr2||ubiquinol-cytochrome-c reductase complex core
protein Qcr2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 426
Score = 65.3 bits (152), Expect = 1e-11
Identities = 54/223 (24%), Positives = 107/223 (47%), Gaps = 4/223 (1%)
Frame = +3
Query: 183 GLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLELLVEN 362
G+ A ++ AT ++ + I+AGSRY+ GV+H LE AFK T +RS + E
Sbjct: 30 GVSFAGRETPTATGSLSVVINAGSRYQPDA--GVSHLLEKFAFKTTEERSALRITRESEL 87
Query: 363 MGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILR-EMQD 539
+G L+ +RE + A+ L + +LA+++ + ++ E R E +
Sbjct: 88 LGGQLSTQITREHIILTARFLNEYLEYYARLLAEVVDATKFLPFQLTEEVLPTARIESEL 147
Query: 540 VESNLQEVVFDHLHATAFQGTPLGQTILGP---TKNIKKISKADLQSYIRNHYQPGRIVL 710
++ V LH AF +G + P + +I +I ++Y+++++ V+
Sbjct: 148 FREDILRVAMAKLHEKAFH-RGIGNEVYLPASASPSISEIKDFASKAYVKSNFS----VI 202
Query: 711 SGAGGVEHERLVDLASKHFSGLKNSTCDVELTPCRYTGSEIRV 839
S G + ++ DL +K+F+ + + + ++ P + + E RV
Sbjct: 203 S--SGPDVQKASDLCAKYFAVIPDGS-PLKSAPTKISSGESRV 242
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 50.8 bits (116), Expect = 3e-07
Identities = 46/179 (25%), Positives = 73/179 (40%), Gaps = 13/179 (7%)
Frame = +3
Query: 261 ETSKNNGVAHFLEHMAFKGTSKRSQTD-LELLVENMGAHLNAYTSREQTVFYAKCLAND- 434
E N G H LEH+ F G+ K L +NA T + T + D
Sbjct: 52 EAHDNLGCPHTLEHLCFMGSKKYPMNGILTKFAGRACGDINACTDVDYTSYELSAAEEDG 111
Query: 435 ----VPV-AVEILADIIQNSSLAEPEIE-----RERGVILREMQDVESNLQEVVFDHLHA 584
+PV A IL+ I+ + + E GV+ EMQ+ +S+ +V+FD +
Sbjct: 112 FLRLLPVFADHILSPILSDEAFCTEVYHINGMGEESGVVYSEMQNTQSSETDVMFDCMRT 171
Query: 585 TAFQGTP-LGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEHERLVDLAS 758
+ + T G ++K+S ++ Y + Y P I L G + RL+ AS
Sbjct: 172 SQYPVTSGYYYETGGHPSELRKLSIEKIREYHKEMYVPSNICLIVTGCINESRLLSCAS 230
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 48.8 bits (111), Expect = 1e-06
Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 10/235 (4%)
Frame = +3
Query: 162 KLTVLDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQ 335
+L L+N L + D A+ + + GS+ + G+AHF EH+ F GT K +
Sbjct: 25 RLIKLENDLEVLLVRDPETDNASAAIDVHIGSQSNPRELLGLAHFCEHLLFMGTKKYPDE 84
Query: 336 TDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE-R 512
+ +E+ NAYT+ T +Y + + + A++ A + E +RE R
Sbjct: 85 NEYRKYLESHNGISNAYTASNNTNYYFEVSHDALYGALDRFAQFFIDPLFLEECKDREIR 144
Query: 513 GVILREMQDVESN------LQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSY 674
V ++++S+ L V+ + + T +T+ K + + +L +
Sbjct: 145 AVDSEHCKNLQSDSWRFWRLYSVLSNPKSVFSKFNTGNIETLGDVPKELGLDVRQELLKF 204
Query: 675 IRNHYQPGRIVLSGAGGVEHERLVDLASKHFSGLKNSTCDVELTP-CRYTGSEIR 836
+Y + L G + L D A++ FS +KN + P YT +E+R
Sbjct: 205 YDKYYSANIMKLVIIGREPLDVLQDWAAELFSPIKNKAVPIPKFPDPPYTDNEVR 259
>SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 992
Score = 37.1 bits (82), Expect = 0.003
Identities = 40/194 (20%), Positives = 72/194 (37%), Gaps = 21/194 (10%)
Frame = +3
Query: 249 GSRYETSKNNGVAHFLEHMAFKGTSKRSQTD--LELLVENMGAHLNAYTSREQTVF-YAK 419
G + + G+ H LEH G++K D ++L ++ +NA+T+ + T + +A
Sbjct: 78 GFQTPAENDEGIPHILEHTTLCGSNKYPVRDPFFKMLNRSLATFMNAFTASDFTFYPFAT 137
Query: 420 CLANDVPVAVEILADIIQNSSLAEPEIERE------------------RGVILREMQDVE 545
D ++ D L + + +E GV+ EM+
Sbjct: 138 VNTTDYKNLRDVYLDATLFPKLRKLDFLQEGWRFEHADVNDKKSPIIFNGVVYNEMKGQV 197
Query: 546 SNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGG 725
S+ + + FQGT G G I + +L + R+HY P + G
Sbjct: 198 SDSSYIFYMLFQQHLFQGTAYGFNSGGDPLAIPDLKYEELVKFHRSHYHPSNAKILSYGS 257
Query: 726 VEHERLVDLASKHF 767
E + S+ F
Sbjct: 258 FPLEDNLSALSETF 271
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 632 GRSKNCLTQWGTLECCCVKVIKHNLLKVTFDILHFAKNDTAFSF 501
GRS C +WG L+ C + N LKVT + F N+ +F
Sbjct: 2146 GRSFACKKRWGFLQMPCT---RENFLKVTLQV--FKSNEDTCNF 2184
>SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 785
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 571 ITFTQQHSKVPHWVKQFLD--LPKILRKSLRLTYRATLGTTINL 696
+TF +++ P ++ F+D L K RK++ + ATL ++ L
Sbjct: 412 VTFVDGYTRAPEYISLFIDDNLKKDARKAIEGSIEATLQNSVTL 455
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 521 NDTAFSFDFGFGEGGILYDISKDLYCYG 438
N F +F G+ G+ YDI + L YG
Sbjct: 641 NRNIFHIEFDLGDSGLTYDIGEALGVYG 668
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 285 AHFLEHMAFKGTSKRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAV-EILA 461
A+F + +G+ S T L V N + ++ RE+ VF + PV++ + +
Sbjct: 430 AYFSKSRYVEGSGSMSTTPLATSVNNSYKLPSGFSVREEAVFSSPTTEGSRPVSLARLKS 489
Query: 462 DIIQNSSLAEPE 497
+ I S A PE
Sbjct: 490 EPIFRSDTASPE 501
>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
Ran1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 470
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 364 WVHT*TPTRPGNKQFFTQNASLMTSP 441
W H TPT P + Q T N+SL P
Sbjct: 361 WNHCATPTIPVSLQVLTPNSSLKVDP 386
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 759 YWPDLLTFHVQLHQLQTKQYVQVDSGS 679
+W +L +LHQL+ K+ + V + S
Sbjct: 115 FWETVLGMECRLHQLRNKELISVSAAS 141
>SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 434
Score = 25.8 bits (54), Expect = 8.3
Identities = 23/107 (21%), Positives = 43/107 (40%)
Frame = +3
Query: 198 TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLELLVENMGAHL 377
T+ SG +GLW+ Y+ SK + + F+ + LEL + M
Sbjct: 280 TQGSGIFLTAIGLWL-----YDRSKKGNLYESCKVKEFEKDA------LELEEQTMEDEK 328
Query: 378 NAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGV 518
+ +S Q+ FY K + ++ + +I +S + + GV
Sbjct: 329 SYPSSGTQSPFYGKNFLPQITPRLDSVVPLISDSPMTPNSVYSNEGV 375
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,655,363
Number of Sequences: 5004
Number of extensions: 78117
Number of successful extensions: 225
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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