Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0320
(894 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g02090.2 68416.m00175 mitochondrial processing peptidase beta... 281 3e-76
At3g02090.1 68416.m00174 mitochondrial processing peptidase beta... 281 3e-76
At3g16480.1 68416.m02103 mitochondrial processing peptidase alph... 124 8e-29
At1g51980.1 68414.m05863 mitochondrial processing peptidase alph... 123 2e-28
At5g56730.1 68418.m07080 peptidase M16 family protein / insulina... 72 6e-13
At5g42390.1 68418.m05161 metalloendopeptidase identical to chlor... 58 1e-08
At1g06900.1 68414.m00733 peptidase M16 family protein / insulina... 44 2e-04
At2g41790.1 68415.m05165 peptidase M16 family protein / insulina... 43 2e-04
At1g69523.1 68414.m07991 UbiE/COQ5 methyltransferase family prot... 33 0.26
At5g48375.1 68418.m05977 glycosyl hydrolase family 1 protein con... 30 1.8
At1g64540.1 68414.m07316 F-box family protein contains F-box dom... 30 1.8
At1g49630.3 68414.m05566 peptidase M16 family protein / insulina... 30 1.8
At1g49630.2 68414.m05565 peptidase M16 family protein / insulina... 30 1.8
At1g49630.1 68414.m05564 peptidase M16 family protein / insulina... 30 1.8
At5g03640.1 68418.m00323 protein kinase family protein contains ... 29 3.1
At3g19170.1 68416.m02434 peptidase M16 family protein / insulina... 29 3.1
At2g33180.1 68415.m04065 expressed protein 29 4.2
At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR ... 29 5.5
At1g79470.1 68414.m09262 inosine-5'-monophosphate dehydrogenase ... 28 7.3
At4g30980.1 68417.m04397 basic helix-loop-helix (bHLH) family pr... 28 9.6
At1g65070.1 68414.m07377 DNA mismatch repair MutS family protein... 28 9.6
>At3g02090.2 68416.m00175 mitochondrial processing peptidase beta
subunit, putative similar to mitochondrial processing
peptidase beta subunit, mitochondrial precursor,
Beta-MPP [Human] SWISS-PROT:O75439
Length = 535
Score = 281 bits (690), Expect = 3e-76
Identities = 136/246 (55%), Positives = 180/246 (73%), Gaps = 5/246 (2%)
Frame = +3
Query: 141 LVNVPPTKLTVLDNGLRIATEDS-GAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKG 317
+++ P T++T L NGLR+ATE + A TATVG+WIDAGSR+E+ + NG AHFLEHM FKG
Sbjct: 91 ILSAPETRVTTLPNGLRVATESNLSAKTATVGVWIDAGSRFESDETNGTAHFLEHMIFKG 150
Query: 318 TSKRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPE 497
T +R+ LE +E++G HLNAYTSREQT +YAK L ++V A+++LADI+QNS E
Sbjct: 151 TDRRTVRALEEEIEDIGGHLNAYTSREQTTYYAKVLDSNVNQALDVLADILQNSKFEEQR 210
Query: 498 IERERGVILREMQDVESNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSYI 677
I RER VILREMQ+VE EVV DHLHATAFQ TPLG+TILGP +N+K I++ DLQ+YI
Sbjct: 211 INRERDVILREMQEVEGQTDEVVLDHLHATAFQYTPLGRTILGPAQNVKSITREDLQNYI 270
Query: 678 RNHYQPGRIVLSGAGGVEHERLVDLASKHFSGLKNS-TCDVELT---PCRYTGSEIRVRD 845
+ HY R+V++ AG V+HE +V+ K F+ L + T +L P +TGSE+R+ D
Sbjct: 271 KTHYTASRMVIAAAGAVKHEEVVEQVKKLFTKLSSDPTTTSQLVANEPASFTGSEVRMID 330
Query: 846 DSMPLA 863
D +PLA
Sbjct: 331 DDLPLA 336
>At3g02090.1 68416.m00174 mitochondrial processing peptidase beta
subunit, putative similar to mitochondrial processing
peptidase beta subunit, mitochondrial precursor,
Beta-MPP [Human] SWISS-PROT:O75439
Length = 531
Score = 281 bits (690), Expect = 3e-76
Identities = 136/246 (55%), Positives = 180/246 (73%), Gaps = 5/246 (2%)
Frame = +3
Query: 141 LVNVPPTKLTVLDNGLRIATEDS-GAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKG 317
+++ P T++T L NGLR+ATE + A TATVG+WIDAGSR+E+ + NG AHFLEHM FKG
Sbjct: 91 ILSAPETRVTTLPNGLRVATESNLSAKTATVGVWIDAGSRFESDETNGTAHFLEHMIFKG 150
Query: 318 TSKRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPE 497
T +R+ LE +E++G HLNAYTSREQT +YAK L ++V A+++LADI+QNS E
Sbjct: 151 TDRRTVRALEEEIEDIGGHLNAYTSREQTTYYAKVLDSNVNQALDVLADILQNSKFEEQR 210
Query: 498 IERERGVILREMQDVESNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSYI 677
I RER VILREMQ+VE EVV DHLHATAFQ TPLG+TILGP +N+K I++ DLQ+YI
Sbjct: 211 INRERDVILREMQEVEGQTDEVVLDHLHATAFQYTPLGRTILGPAQNVKSITREDLQNYI 270
Query: 678 RNHYQPGRIVLSGAGGVEHERLVDLASKHFSGLKNS-TCDVELT---PCRYTGSEIRVRD 845
+ HY R+V++ AG V+HE +V+ K F+ L + T +L P +TGSE+R+ D
Sbjct: 271 KTHYTASRMVIAAAGAVKHEEVVEQVKKLFTKLSSDPTTTSQLVANEPASFTGSEVRMID 330
Query: 846 DSMPLA 863
D +PLA
Sbjct: 331 DDLPLA 336
>At3g16480.1 68416.m02103 mitochondrial processing peptidase alpha
subunit, putative similar to mitochondrial processing
peptidase alpha subunit, mitochondrial precursor,
Alpha-MPP (Ubiquinol-cytochrome C reductase subunit II)
[Potato] SWISS-PROT:P29677
Length = 499
Score = 124 bits (299), Expect = 8e-29
Identities = 77/232 (33%), Positives = 119/232 (51%), Gaps = 2/232 (0%)
Frame = +3
Query: 147 NVPPTKL--TVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGT 320
+V P+KL T L NGL IATE S A++GL++D GS YET + G H LE MAFK T
Sbjct: 68 HVEPSKLKTTTLPNGLTIATEMSPNPAASIGLYVDCGSIYETPQFRGATHLLERMAFKST 127
Query: 321 SKRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEI 500
RS L +E +G + +A SREQ + L VP VE+L D ++N + + E+
Sbjct: 128 LNRSHFRLVREIEAIGGNTSASASREQMGYTIDALKTYVPEMVEVLIDSVRNPAFLDWEV 187
Query: 501 ERERGVILREMQDVESNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSYIR 680
E + E+ + +N + + +H+ + G L + P I ++ L++++
Sbjct: 188 NEELRKVKVEIGEFATNPMGFLLEAVHSAGYSGA-LANPLYAPESAITGLTGEVLENFVF 246
Query: 681 NHYQPGRIVLSGAGGVEHERLVDLASKHFSGLKNSTCDVELTPCRYTGSEIR 836
+Y R+VL+ A GV+HE L+ + S L N E +Y G + R
Sbjct: 247 ENYTASRMVLA-ASGVDHEELLKVVEPLLSDLPNVPRPAE-PKSQYVGGDFR 296
>At1g51980.1 68414.m05863 mitochondrial processing peptidase alpha
subunit, putative similar to mitochondrial processing
peptidase alpha subunit, mitochondrial precursor,
Alpha-MPP (Ubiquinol-cytochrome C reductase subunit II)
[Potato] SWISS-PROT:P29677
Length = 503
Score = 123 bits (296), Expect = 2e-28
Identities = 75/232 (32%), Positives = 122/232 (52%), Gaps = 3/232 (1%)
Frame = +3
Query: 150 VPPTKL--TVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTS 323
V P+KL T L NGL+IA+E + A++GL++D GS YE +G H LE MAFK T
Sbjct: 73 VEPSKLQITTLPNGLKIASETTPNPAASIGLYVDCGSIYEAPYFHGATHLLERMAFKSTL 132
Query: 324 KRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIE 503
R+ L +E +G + +A SREQ + L VP VE+L D ++N + + E+
Sbjct: 133 NRTHFRLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVN 192
Query: 504 RERGVILREMQDVESNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSYIRN 683
E + E+ ++ N + + +H+ + G PL + P + +++ L+ ++
Sbjct: 193 EELRKMKVEIAELAKNPMGFLLEAIHSAGYSG-PLASPLYAPESALDRLNGELLEEFMTE 251
Query: 684 HYQPGRIVLSGAGGVEHERLVDLASKHFSGLKNSTCDVELTP-CRYTGSEIR 836
++ R+VL+ A GVEHE L+ +A S L N +L P +Y G + R
Sbjct: 252 NFTAARMVLA-ASGVEHEELLKVAEPLTSDLPN--VPPQLAPKSQYVGGDFR 300
>At5g56730.1 68418.m07080 peptidase M16 family protein / insulinase
family protein contains Pfam domain, PF05193: Peptidase
M16 inactive domain
Length = 956
Score = 71.7 bits (168), Expect = 6e-13
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 12/217 (5%)
Frame = +3
Query: 174 LDNGL--RIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLE 347
LDNGL + A + L + GS E GVAH +EH+AF T++ + D+
Sbjct: 45 LDNGLIYYVRRNSKPRMRAALALAVKVGSVLEEEDQRGVAHIVEHLAFSATTRYTNHDIV 104
Query: 348 LLVENMGAHL----NAYTSREQTVFYAKCLANDVP----VAVEILADIIQNSSLAEPEIE 503
+E++GA NA T+ ++T+ Y + D P A+ ILA+ +++ ++E
Sbjct: 105 KFLESIGAEFGPCQNAMTTADETI-YELFVPVDKPELLSQAISILAEFSSEIRVSKEDLE 163
Query: 504 RERGVILREMQDVESNLQEVVFDHLHATAFQGTPLGQTI-LGPTKNIKKISKADLQSYIR 680
+ERG ++ E + N + D +G+ + + +G K I+ + A ++ + +
Sbjct: 164 KERGAVMEEYRG-NRNATGRMQDSHWQLMMEGSKYAERLPIGLEKVIRSVPAATVKQFYQ 222
Query: 681 NHYQPGRIVLSGAGGV-EHERLVDLASKHFSGLKNST 788
Y + + G + + +VDL HF ++S+
Sbjct: 223 KWYHLCNMAVVAVGDFPDTKTVVDLIKTHFEDKRSSS 259
>At5g42390.1 68418.m05161 metalloendopeptidase identical to
chloroplast processing enzyme metalloendopeptidase
[Arabidopsis thaliana] gi|2827039|gb|AAC39482
Length = 1265
Score = 57.6 bits (133), Expect = 1e-08
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Frame = +3
Query: 240 IDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLELLVENMGAHLNAYTSREQTVF--- 410
+ GS E G+AH +EH+AF G+ KR +LL GA NAYT TVF
Sbjct: 224 VHVGSIDEEEDEQGIAHMIEHVAFLGSKKRE----KLL--GTGARSNAYTDFHHTVFHIH 277
Query: 411 ---YAKCLANDV-PVAVEILADIIQNSSLAEPEIERERGVILREMQ---DVESNLQEVVF 569
+ K +D+ P ++ L +I + +E+ER IL E+Q +E + +
Sbjct: 278 SPTHTKDSEDDLFPSVLDALNEIAFHPKFLSSRVEKERRAILSELQMMNTIEYRVDCQLL 337
Query: 570 DHLHATAFQGTPLGQTI-LGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEH-ERL 743
HLH+ LG+ +G + IKK ++ + Y P L G +++ R+
Sbjct: 338 QHLHSE----NKLGRRFPIGLEEQIKKWDVDKIRKFHERWYFPANATLYIVGDIDNIPRI 393
Query: 744 VDLASKHF--SGLKNSTCDVELTP 809
V F +GL N + +P
Sbjct: 394 VHNIEAVFGKNGLDNESTPSSPSP 417
>At1g06900.1 68414.m00733 peptidase M16 family protein / insulinase
family protein contains Pfam domain, PF05193: Peptidase
M16 inactive domain; similar to insulin-degrading enzyme
(Insulysin, Insulinase, Insulin protease) [Mouse]
SWISS-PROT:Q9JHR7
Length = 1023
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 204 DSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQTDLELLVENMGAHLN 380
D A + + GS + + G+AHFLEHM F G+++ + + + + G N
Sbjct: 101 DHQTKKAAAAMCVSMGSFLDPPEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSN 160
Query: 381 AYTSREQTVFY 413
AYT E T ++
Sbjct: 161 AYTEMEHTCYH 171
>At2g41790.1 68415.m05165 peptidase M16 family protein / insulinase
family protein contains Pfam domain, PF05193: Peptidase
M16 inactive domain; similar to insulin-degrading enzyme
(Insulysin, Insulinase, Insulin protease) [Mouse]
SWISS-PROT:Q9JHR7
Length = 970
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Frame = +3
Query: 162 KLTVLDNGLRIAT-EDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQT 338
++ VL N L++ D + + GS + G+AHFLEHM F + K +
Sbjct: 26 RMIVLKNLLQVLLISDPDTDKCAASMSVSVGSFSDPQGLEGLAHFLEHMLFYASEKYPEE 85
Query: 339 D-LELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERG 515
D + G NAYT+ E+T ++ A+ A++ A ++ RE
Sbjct: 86 DSYSKYITEHGGSTNAYTASEETNYHFDVNADCFDEALDRFAQFFIKPLMSADATMREIK 145
Query: 516 VILREMQ 536
+ E Q
Sbjct: 146 AVDSENQ 152
>At1g69523.1 68414.m07991 UbiE/COQ5 methyltransferase family protein
low similarity to SP|Q05197 Phosphatidylethanolamine
N-methyltransferase (EC 2.1.1.17) [Rhodopseudomonas
sphaeroides] {Rhodobacter sphaeroides}; contains Pfam
profile PF01209: methlytransferase, UbiE/COQ5 family
Length = 300
Score = 33.1 bits (72), Expect = 0.26
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 498 IERERGVILREMQDVESNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSYI 677
+ E G LR +Q V LQ+VV D H T G + + ++KK S + L +YI
Sbjct: 232 VAAEDGTFLRLVQTVLDPLQQVVADGCHLTRHTGESILEARFNGGADVKKTSLSRL-AYI 290
Query: 678 RNH 686
+H
Sbjct: 291 SSH 293
>At5g48375.1 68418.m05977 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
identical to thioglucosidase (GI:871992) [Arabidopsis
thaliana]
Length = 439
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 129 YKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMA 308
Y A+ PP +LTVL++ L + ++ +G W +A S Y G+ + LEH
Sbjct: 320 YVYAIPANPPNRLTVLNDSLSAFSYEN--KDGPIGPWFNADSYYHP---RGILNVLEHFK 374
Query: 309 FK 314
K
Sbjct: 375 TK 376
>At1g64540.1 68414.m07316 F-box family protein contains F-box domain
Pfam:PF00646
Length = 444
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = -3
Query: 868 YIASGIESSRTLI----SDPVYLQGVSSTSHVEFFNPLKCL 758
Y+ +GI SS TL+ SD +YLQG+ FF LK L
Sbjct: 109 YLDTGILSSNTLVKLTLSDQIYLQGLVPHDGTVFFPALKTL 149
>At1g49630.3 68414.m05566 peptidase M16 family protein / insulinase
family protein contains Pfam domain, PF05193: Peptidase
M16 inactive domain
Length = 1080
Score = 30.3 bits (65), Expect = 1.8
Identities = 36/161 (22%), Positives = 63/161 (39%), Gaps = 20/161 (12%)
Frame = +3
Query: 273 NNGVAHFLEHMAFKGTSKRSQTD--LELLVENMGAHLNAYTSREQTVF-YAKCLANDVPV 443
+ G+ H LEH G+ K + +ELL ++ LNA+T ++T + A D
Sbjct: 156 STGIPHILEHSVLCGSRKYPMKEPFVELLKGSLHTFLNAFTYPDRTCYPVASTNKKDFYN 215
Query: 444 AVEILADII----------------QNSSLAEP-EIERERGVILREMQDVESNLQEVVFD 572
V++ D + + L +P E +GV+ EM+ V S ++
Sbjct: 216 LVDVYLDAVFFPKCVDDVHTFQQEGWHYELNDPSEDISYKGVVFNEMKGVYSQPDNILGR 275
Query: 573 HLHATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQP 695
G G K+I K++ + + R +Y P
Sbjct: 276 VTQQALCPENTYGVDSGGDPKDIPKLTFEKFKEFHRQYYHP 316
>At1g49630.2 68414.m05565 peptidase M16 family protein / insulinase
family protein contains Pfam domain, PF05193: Peptidase
M16 inactive domain
Length = 1080
Score = 30.3 bits (65), Expect = 1.8
Identities = 36/161 (22%), Positives = 63/161 (39%), Gaps = 20/161 (12%)
Frame = +3
Query: 273 NNGVAHFLEHMAFKGTSKRSQTD--LELLVENMGAHLNAYTSREQTVF-YAKCLANDVPV 443
+ G+ H LEH G+ K + +ELL ++ LNA+T ++T + A D
Sbjct: 156 STGIPHILEHSVLCGSRKYPMKEPFVELLKGSLHTFLNAFTYPDRTCYPVASTNKKDFYN 215
Query: 444 AVEILADII----------------QNSSLAEP-EIERERGVILREMQDVESNLQEVVFD 572
V++ D + + L +P E +GV+ EM+ V S ++
Sbjct: 216 LVDVYLDAVFFPKCVDDVHTFQQEGWHYELNDPSEDISYKGVVFNEMKGVYSQPDNILGR 275
Query: 573 HLHATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQP 695
G G K+I K++ + + R +Y P
Sbjct: 276 VTQQALCPENTYGVDSGGDPKDIPKLTFEKFKEFHRQYYHP 316
>At1g49630.1 68414.m05564 peptidase M16 family protein / insulinase
family protein contains Pfam domain, PF05193: Peptidase
M16 inactive domain
Length = 1080
Score = 30.3 bits (65), Expect = 1.8
Identities = 36/161 (22%), Positives = 63/161 (39%), Gaps = 20/161 (12%)
Frame = +3
Query: 273 NNGVAHFLEHMAFKGTSKRSQTD--LELLVENMGAHLNAYTSREQTVF-YAKCLANDVPV 443
+ G+ H LEH G+ K + +ELL ++ LNA+T ++T + A D
Sbjct: 156 STGIPHILEHSVLCGSRKYPMKEPFVELLKGSLHTFLNAFTYPDRTCYPVASTNKKDFYN 215
Query: 444 AVEILADII----------------QNSSLAEP-EIERERGVILREMQDVESNLQEVVFD 572
V++ D + + L +P E +GV+ EM+ V S ++
Sbjct: 216 LVDVYLDAVFFPKCVDDVHTFQQEGWHYELNDPSEDISYKGVVFNEMKGVYSQPDNILGR 275
Query: 573 HLHATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQP 695
G G K+I K++ + + R +Y P
Sbjct: 276 VTQQALCPENTYGVDSGGDPKDIPKLTFEKFKEFHRQYYHP 316
>At5g03640.1 68418.m00323 protein kinase family protein contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 926
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +1
Query: 517 SFFAKCKMSKVTFRRLCLITFTQQHSKVPHWVKQFLDLPKILRKSLRLTYRATLGTTIN 693
SF KC++ + R I ++ + + +PH +D + R L+L YR +L IN
Sbjct: 3 SFAGKCEIVEEKEDRQNSIGYSAKSTTIPHSRSSIVDDKDLERPVLKLGYRGSLEDDIN 61
>At3g19170.1 68416.m02434 peptidase M16 family protein / insulinase
family protein contains Pfam domain, PF05193: Peptidase
M16 inactive domain
Length = 1080
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +3
Query: 273 NNGVAHFLEHMAFKGTSKR--SQTDLELLVENMGAHLNAYTSREQTVF-YAKCLANDVPV 443
+ G+ H LEH G+ K + +ELL ++ LNA+T ++T + A D
Sbjct: 157 STGIPHILEHSVLCGSRKYPVKEPFVELLKGSLHTFLNAFTYPDRTCYPVASTNTKDFYN 216
Query: 444 AVEILADII 470
V++ D +
Sbjct: 217 LVDVYLDAV 225
>At2g33180.1 68415.m04065 expressed protein
Length = 166
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 15 NILTHSIKITTKMLKVATTLRVISSQGNQVRTLATAAAYKQALVNVPPTKLT 170
N + +++ + ++ L I S+ ++ RTL TA A + V++PP LT
Sbjct: 28 NRIGQALRFSNVRMRKPAYLGTILSEKSRARTLTTAEAVSGSGVSLPPLDLT 79
>At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 893
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 522 LREMQDVESNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISK 656
LRE++ ++ + V+ + +AF+ PL TI+G K + K K
Sbjct: 121 LREVEKLKGEVFGVITEQASTSAFEERPLQPTIVGQKKMLDKAWK 165
>At1g79470.1 68414.m09262 inosine-5'-monophosphate dehydrogenase
identical to inosine-5'-monophosphate dehydrogenase
SP|P47996 {Arabidopsis thaliana}
Length = 503
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = -2
Query: 305 HVFKEM---SDTIVLGGFIAGASVDPESYSGSGGSRI 204
H+ K + + T+++G F+AG++ P Y + G RI
Sbjct: 363 HIVKALVLGASTVMMGSFLAGSTEAPGGYEYTNGKRI 399
>At4g30980.1 68417.m04397 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 310
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 210 GAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFK 314
GAA+A+ + DAG +E + ++G A EH K
Sbjct: 199 GAASASSQISEDAGGSHENTSSSGEAKMTEHQVAK 233
>At1g65070.1 68414.m07377 DNA mismatch repair MutS family protein
contains Pfam profile PF00488: MutS domain V
Length = 857
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +3
Query: 474 NSSLAEPEIERERGVILREMQDVESNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKIS 653
+++LA E+ + RG+ L E+QD+ ++ V L T + + T+ T +K+
Sbjct: 98 SAALAAMEMMKSRGLGLSEIQDLSDIVERAVSGQL-LTVRELCTVRSTLTAATSTFQKLR 156
Query: 654 KA 659
KA
Sbjct: 157 KA 158
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,354,064
Number of Sequences: 28952
Number of extensions: 420023
Number of successful extensions: 1324
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1314
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2100696768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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