Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0319
         (674 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0442 - 21280804-21280897,21281287-21281684                       31   1.1  
01_06_0192 + 27347369-27348826,27349124-27349264,27349350-273510...    29   4.5  
05_06_0012 + 24844413-24844913                                         28   7.8  

>05_04_0442 - 21280804-21280897,21281287-21281684
          Length = 163

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 226 ERRRKKTEEVRQNNRCWRR*STKNQKAKIGKDSCKKREEA 345
           E   + T+ V +NNRC ++ +T  + A    +SC ++  A
Sbjct: 22  ESESRSTDSVSKNNRCGKKAATGRKAAAAAVESCSRKRAA 61


>01_06_0192 +
           27347369-27348826,27349124-27349264,27349350-27351081,
           27353739-27354606,27354784-27355957
          Length = 1790

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +1

Query: 28  SIVWRSRKKIKIKGEEKLD 84
           ++VWRSR + ++KG+ KLD
Sbjct: 133 NVVWRSRLRDRVKGKAKLD 151


>05_06_0012 + 24844413-24844913
          Length = 166

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 572 SGCIFFSVAIDVIPSPVALRSSFMWML 492
           SGCIF ++++ ++PSP  L   F+  L
Sbjct: 22  SGCIFLTLSLRLLPSPCGLLLVFLHAL 48


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,969,101
Number of Sequences: 37544
Number of extensions: 226412
Number of successful extensions: 492
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)