Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0318
(735 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1391 + 33195508-33195903,33197506-33197592,33197678-33198196 83 3e-16
04_04_0711 - 27468045-27468264,27468831-27468935,27469431-274694... 72 5e-13
03_05_0217 - 22056301-22056648 54 9e-08
04_04_1628 + 34874688-34874915,34875182-34875232,34875532-348756... 32 0.54
02_02_0582 - 11798252-11798908 31 0.95
03_01_0024 - 214141-215097 31 1.3
05_02_0161 + 7199005-7199505,7200118-7200378,7201532-7201621 30 2.2
04_04_1002 - 30025914-30026021,30026116-30026297,30026626-300269... 29 3.8
03_01_0629 + 4616925-4617350 29 3.8
07_03_0892 + 22350810-22351658 29 5.1
04_04_0677 + 27195264-27195291,27196034-27196271,27196350-271965... 29 5.1
02_03_0357 + 18075171-18077240 29 5.1
01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983 29 5.1
01_05_0691 + 24330491-24332269 29 5.1
08_02_1130 + 24517319-24518149,24519374-24519868,24519954-245201... 28 8.8
04_03_0564 + 17198094-17198441 28 8.8
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 8.8
02_03_0268 + 17100666-17101235 28 8.8
>04_04_1391 + 33195508-33195903,33197506-33197592,33197678-33198196
Length = 333
Score = 82.6 bits (195), Expect = 3e-16
Identities = 50/114 (43%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Frame = -1
Query: 618 TVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPLIGGGTYADDNVGGISTTGHGESILK 439
TVG +D+ GH A ATSTGG+ KM GRIGD+PLIG GTYA +S TG GE+I++
Sbjct: 203 TVGCAVVDSSGHTAAATSTGGLMNKMTGRIGDSPLIGSGTYA-CGACAVSCTGEGEAIIR 261
Query: 438 YCLAHTIIKLME-GGLDADTATRQAVNGMTARLN-NTAGAITLSKNGDVGIHFS 283
LA + +ME G A V RL+ AG I +S G+V F+
Sbjct: 262 STLARDVAAVMEYRGAGLQEAVDYCVK---KRLDEGFAGLIAVSSTGEVAYGFN 312
>04_04_0711 -
27468045-27468264,27468831-27468935,27469431-27469489,
27469566-27470009,27470123-27470187,27470871-27471066,
27471429-27471590
Length = 416
Score = 71.7 bits (168), Expect = 5e-13
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = -1
Query: 618 TVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPLIGGGTYADDNVGGISTTGHGESILK 439
T+ ID G IA TST G K+ GR+GD P+ G YADD VG TG G+ +++
Sbjct: 281 TISMAVIDKMGRIAAGTSTNGATFKIPGRVGDGPIPGSSAYADDEVGACGATGDGDIMMR 340
Query: 438 YCLAHTIIKLMEGGLDADTATRQAVNGMTARLNNTAGAI-TLSKNG 304
+ + +++ M G++ A A+ + + + GA+ ++K G
Sbjct: 341 FLPCYQVVESMRRGMEPRDAAMDAILRIARKYPDFVGAVFAINKKG 386
>03_05_0217 - 22056301-22056648
Length = 115
Score = 54.4 bits (125), Expect = 9e-08
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Frame = -1
Query: 543 MVGRIGDTPLIGGGTYADDNVGGISTTGHGESILKYCLAHTIIKLME----GGLDADTAT 376
M GRIGDTP+IG GTYA + + +S TG GE+I+++ +A + L+E GL A
Sbjct: 1 MAGRIGDTPVIGAGTYA-NALCAVSATGVGEAIIRHTVARDVAALLEHAPPAGLSLGDAA 59
Query: 375 RQAVNGMTARLNNTAGAITLSKNGDVGIHFS 283
+ V G+ G + +S G+V + ++
Sbjct: 60 ARVVAGVPP---GKVGLVAVSAAGEVAMAYN 87
>04_04_1628 +
34874688-34874915,34875182-34875232,34875532-34875652,
34875739-34875788,34876395-34876524,34877007-34877170,
34877262-34877300,34877301-34877464,34877808-34877931,
34878002-34878103,34878208-34878297
Length = 420
Score = 31.9 bits (69), Expect = 0.54
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 27/128 (21%)
Frame = -1
Query: 618 TVGPVAIDADGHIAVATSTGGINGK-------------MVGRIGDTPLIGGGTYADDN-- 484
TVG V +DA G+IA S+GGI K + GR+G + G G +A
Sbjct: 224 TVGAVCVDAYGNIASGASSGGIALKRFPRPSISIGFLQVDGRVGLAAMYGSGCWASSKGP 283
Query: 483 -----VGGISTTGHGESILK------YCLAHTIIKLMEGGLDADT-ATRQAVNGMTARLN 340
+ G TG GE +++ C++ ++I+ G A T RQAV + +
Sbjct: 284 FGTPFIVGCCATGAGEHLIRGFAARECCISSSLIQ--SGPASACTKVLRQAVQSSSEMSH 341
Query: 339 NTAGAITL 316
+T + L
Sbjct: 342 DTGAGLLL 349
>02_02_0582 - 11798252-11798908
Length = 218
Score = 31.1 bits (67), Expect = 0.95
Identities = 29/91 (31%), Positives = 35/91 (38%)
Frame = -1
Query: 669 GDDQRTEIGRKDEGGVGTVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPLIGGGTYAD 490
G D IG GG GT G +V GG G VG G IGGG A
Sbjct: 65 GHDISIGIGGGFGGGAGTT------RGGGASVGGGAGGGVGIDVGHGGVDVGIGGGGGAA 118
Query: 489 DNVGGISTTGHGESILKYCLAHTIIKLMEGG 397
N GG+ G G + + H + + GG
Sbjct: 119 VNGGGVHAGGGGGGGVGVHIGHGGVSISTGG 149
>03_01_0024 - 214141-215097
Length = 318
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -1
Query: 594 ADGHIAVATSTGGINGKMVGRIGDTPLIGGGTYADDNVGG 475
ADG + GG NGK G +G + GG D VGG
Sbjct: 143 ADGKVDGNGVGGGGNGKKGGEVGGVEVEGGEAEGDGEVGG 182
>05_02_0161 + 7199005-7199505,7200118-7200378,7201532-7201621
Length = 283
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = -1
Query: 633 EGGVGTVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPLIGGGTYADDNVGGISTTGHG 454
EGG G GP D A G G G G P GG G G G
Sbjct: 73 EGGAGVAGPPEADGGDAEGTAGVDAGAGGDAEGTAGGVPADGGAFAGAGGDGADGVAGGG 132
>04_04_1002 -
30025914-30026021,30026116-30026297,30026626-30026908,
30026992-30027630
Length = 403
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -1
Query: 657 RTEIGRKDEGGVGTVGPVAIDADGHIAVATSTGGIN--GKMVGRIGDTPLIGGGTYADDN 484
+ ++ D+ V A+G V + G + GK++ IG+ P GG T A +
Sbjct: 100 KVKVDDTDQSAVYVCRDANCSANGDCGVTSVAGSVCKCGKVMEYIGEWPQDGGSTAAAGS 159
Query: 483 VGGISTTG 460
GG+ G
Sbjct: 160 DGGVFVKG 167
>03_01_0629 + 4616925-4617350
Length = 141
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -1
Query: 630 GGVGTVGPVAIDADGHIA-VATSTGGINGKMVGRIGDTPLIGGGTYA 493
GG G G D D + VAT G + G + G G ++G GT A
Sbjct: 53 GGAG--GDAMGDGDAAVGGVATGAGAVAGDLAGGAGSGAILGAGTGA 97
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = -1
Query: 648 IGRKDEGGVGTVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPL----IGGGTYADDNV 481
+G + E GV G + A+G +A S GG G +G GD + G G A D
Sbjct: 27 VGAETEEGVTADG---VTAEGALAAGASVGGAGGDAMGD-GDAAVGGVATGAGAVAGDLA 82
Query: 480 GG 475
GG
Sbjct: 83 GG 84
>07_03_0892 + 22350810-22351658
Length = 282
Score = 28.7 bits (61), Expect = 5.1
Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Frame = -1
Query: 630 GGVGTVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPLIGG-------GTYADDNVGGI 472
G + G + DG +A A GG+ G + G I L+GG G A VGG
Sbjct: 151 GAIVDGGLAGVIVDGGLAGAIGGGGLVGGLAGVIVSGGLVGGLAGAIVDGGMAGPIVGGD 210
Query: 471 STTGHGESILKYCLAHTIIKLMEGGL-DADTATRQAVNG 358
G +I+ LA I M+GGL T R + G
Sbjct: 211 LIGGLVGAIVDGGLAGVI---MDGGLAGVGTGARHGLGG 246
>04_04_0677 +
27195264-27195291,27196034-27196271,27196350-27196500,
27196578-27196972,27197270-27197339,27197414-27197696,
27197972-27198297,27198409-27199368
Length = 816
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 193 ILKGFFKCLIVFYSVVDLIVLHISPSH 273
I+ F K +VFYSV+ ++L+ PSH
Sbjct: 37 IVMAFCKPCLVFYSVLTFLILNGGPSH 63
>02_03_0357 + 18075171-18077240
Length = 689
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -1
Query: 726 PESLISESAKEALNDFLTKGDDQRTEIGRKDEGGVGTVGPVAIDADGHIAVA 571
PE+L+ E+ ++ + ++L+ D + R GG G G + G VA
Sbjct: 103 PEALVFEATEDEVAEYLSAVDVAIEHLARGSGGGAGGAGSSSSSTAGRAGVA 154
>01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983
Length = 448
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = -1
Query: 630 GGVGTVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPLIGGGTYADDNVGGISTTGHGE 451
GG G G A+ A G GG+ G G+T L+GGG A GG+ T+G G+
Sbjct: 5 GGAGEDG--ALPASGDCGGGGEDGGLLEGGCG--GETLLLGGGGEAL-GAGGLGTSGGGD 59
>01_05_0691 + 24330491-24332269
Length = 592
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 609 PVAIDADG-HIAVATSTGGINGKMVGRIGDTPL 514
PV + A H A+ T GG+ ++GRI +PL
Sbjct: 382 PVTVTAPSTHAAILTFQGGVRAGLLGRISRSPL 414
>08_02_1130 +
24517319-24518149,24519374-24519868,24519954-24520179,
24520267-24520291,24520925-24521234,24521328-24521888
Length = 815
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -1
Query: 312 KNGDVGIHF--SFKRMAWAYVKNDKVYYGIEH 223
KNGD+G HF S + ++W + +KV Y I H
Sbjct: 386 KNGDIGFHFTRSGETVSWYF---NKVLYAIGH 414
>04_03_0564 + 17198094-17198441
Length = 115
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1
Query: 645 GRKDEGGVGTVGPVAIDADGHIAVATSTGGINGKMV 538
GR+ GGVG VG A DA+G A G + +V
Sbjct: 15 GRRRSGGVGGVGEEATDANGWGMEAVVAGSTSLNLV 50
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 588 GHIAVATSTGGINGKMVGRIGDTPL 514
GH+AVA +GG+ G R+ PL
Sbjct: 18 GHVAVAAESGGVGGGSARRVLHQPL 42
>02_03_0268 + 17100666-17101235
Length = 189
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1
Query: 645 GRKDEGGVGTVGPVAIDADGHIAVATSTGGINGKMV 538
G + GGVG VG A DADG A + G + +V
Sbjct: 19 GGRRLGGVGGVGEEAADADGWGMEAAAAGSTSPNLV 54
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,437,073
Number of Sequences: 37544
Number of extensions: 343879
Number of successful extensions: 1187
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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