Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0318
(735 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1777| Best HMM Match : Asparaginase_2 (HMM E-Value=1e-13) 118 5e-27
SB_33572| Best HMM Match : Asparaginase_2 (HMM E-Value=0) 116 2e-26
SB_13565| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 3e-26
SB_35228| Best HMM Match : Asparaginase_2 (HMM E-Value=8.7e-10) 105 5e-23
SB_8928| Best HMM Match : Ribosomal_L27 (HMM E-Value=5.5) 87 1e-17
SB_47001| Best HMM Match : Asparaginase_2 (HMM E-Value=2.5e-40) 79 3e-15
SB_28509| Best HMM Match : Asparaginase_2 (HMM E-Value=1.6e-10) 70 2e-12
SB_38156| Best HMM Match : Asparaginase_2 (HMM E-Value=1.5e-32) 69 5e-12
SB_35852| Best HMM Match : Collagen (HMM E-Value=0.18) 31 0.73
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 31 0.97
SB_26560| Best HMM Match : 7tm_1 (HMM E-Value=6.3e-09) 31 1.3
SB_41062| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31) 31 1.3
SB_6685| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31) 31 1.3
SB_45152| Best HMM Match : DUF320 (HMM E-Value=2.9) 30 1.7
SB_40046| Best HMM Match : TMS_TDE (HMM E-Value=5.5e-07) 30 2.2
SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83) 29 3.0
SB_57086| Best HMM Match : PT (HMM E-Value=2.4) 29 3.0
SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39) 29 5.2
SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17) 28 6.8
SB_36342| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1) 28 6.8
SB_2691| Best HMM Match : Luteo_Vpg (HMM E-Value=2.1) 28 6.8
SB_36173| Best HMM Match : RVT_1 (HMM E-Value=1.2) 28 9.0
>SB_1777| Best HMM Match : Asparaginase_2 (HMM E-Value=1e-13)
Length = 250
Score = 118 bits (284), Expect = 5e-27
Identities = 60/137 (43%), Positives = 81/137 (59%)
Frame = -1
Query: 618 TVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPLIGGGTYADDNVGGISTTGHGESILK 439
TVG VA+D G+IA ATSTGG+ KM GR+GD+P+ G G YA GG STTGHGESI+K
Sbjct: 104 TVGAVAMDCHGNIACATSTGGLFKKMCGRVGDSPMPGSGGYASKE-GGASTTGHGESIIK 162
Query: 438 YCLAHTIIKLMEGGLDADTATRQAVNGMTARLNNTAGAITLSKNGDVGIHFSFKRMAWAY 259
LA +I +E G + A +N M G I++ K+G+ G FS M WA
Sbjct: 163 VVLAREVIYQLEDGKSVNDACTNGINKMFTLTGGQGGVISIDKHGNYGKAFSTLGMPWAA 222
Query: 258 VKNDKVYYGIEHDQTLE 208
+K V+YG+ + ++
Sbjct: 223 IKAGDVHYGLSPGEDVQ 239
>SB_33572| Best HMM Match : Asparaginase_2 (HMM E-Value=0)
Length = 427
Score = 116 bits (280), Expect = 2e-26
Identities = 59/137 (43%), Positives = 81/137 (59%)
Frame = -1
Query: 618 TVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPLIGGGTYADDNVGGISTTGHGESILK 439
TVG VA+D G+IA ATSTGG+ KM GR+GD+P+ G G YA GG STTGHGESI+K
Sbjct: 242 TVGAVAMDCHGNIACATSTGGLFKKMCGRVGDSPMPGSGGYACKE-GGASTTGHGESIMK 300
Query: 438 YCLAHTIIKLMEGGLDADTATRQAVNGMTARLNNTAGAITLSKNGDVGIHFSFKRMAWAY 259
LA ++ +E G + A +N M G I++ K+G+ G FS M WA
Sbjct: 301 VVLAREVVYHLENGKSVNDACANGINKMFTLTGGQGGVISIDKHGNYGKAFSTLGMPWAA 360
Query: 258 VKNDKVYYGIEHDQTLE 208
+K V+YG+ + ++
Sbjct: 361 IKAGDVHYGLSPGEDVQ 377
>SB_13565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 597
Score = 116 bits (278), Expect = 3e-26
Identities = 57/144 (39%), Positives = 91/144 (63%), Gaps = 2/144 (1%)
Frame = -1
Query: 615 VGPVAIDADGHIAVATSTGGINGKMVGRIGDTPLIGGGTYADDNVGGISTTGHGESILKY 436
VG VA+D+ G++A ATSTGG+ GR+GD+P++G G YAD+ V S+TG GE I++
Sbjct: 401 VGAVAVDSFGNVACATSTGGLTAVHPGRVGDSPIVGCGGYADNQVAAASSTGTGEMIMRV 460
Query: 435 CLAHTIIKLMEGGLDADTATRQAVNGMTARLNNTAGAITLSKNGDVGIHFSFKRMAWAYV 256
LA + +++ G A A A+ M R+ AG I +S++G+ GI F+ + M WA V
Sbjct: 461 NLARYALFMIQIGQTAADAAAAALRYMEQRVGGRAGIIIVSRDGEAGIAFNTEHMPWAQV 520
Query: 255 KNDKVYYGIEHDQ--TLEEPL*DN 190
KN +YG++ + T+++P+ +N
Sbjct: 521 KNGVTFYGLKQGEVKTVKKPVTEN 544
>SB_35228| Best HMM Match : Asparaginase_2 (HMM E-Value=8.7e-10)
Length = 421
Score = 105 bits (251), Expect = 5e-23
Identities = 54/138 (39%), Positives = 76/138 (55%)
Frame = -1
Query: 618 TVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPLIGGGTYADDNVGGISTTGHGESILK 439
TVG VAID G++A TSTGGI+G GR+GD+P+IG G YAD+ + ISTTG GE +L+
Sbjct: 217 TVGAVAIDEFGNVACGTSTGGISGVHPGRVGDSPIIGCGGYADNEIAAISTTGSGEFLLR 276
Query: 438 YCLAHTIIKLMEGGLDADTATRQAVNGMTARLNNTAGAITLSKNGDVGIHFSFKRMAWAY 259
LA + +M+ G + A++ M R+ G I L G+ I S M WA
Sbjct: 277 CTLASHSMYMMQSGKTPTESVFAALDNMDKRIGGKGGMIVLDCEGNAAIAHSTPHMPWAQ 336
Query: 258 VKNDKVYYGIEHDQTLEE 205
+ D +G+ + E
Sbjct: 337 RREDVTAFGVYPGDAMAE 354
Score = 103 bits (247), Expect = 1e-22
Identities = 60/170 (35%), Positives = 85/170 (50%)
Frame = -1
Query: 714 ISESAKEALNDFLTKGDDQRTEIGRKDEGGVGTVGPVAIDADGHIAVATSTGGINGKMVG 535
ISE+ E L + R + R + VG VAID G++A TSTGG+ G G
Sbjct: 25 ISETEPELLRSLNYRA---RAYLSRLFSDNLFEVGAVAIDEFGNVACGTSTGGMTGVYHG 81
Query: 534 RIGDTPLIGGGTYADDNVGGISTTGHGESILKYCLAHTIIKLMEGGLDADTATRQAVNGM 355
R+GD+P+IG G YAD+ + ISTTG GE IL+ LA + +M+ G + A++ M
Sbjct: 82 RVGDSPIIGCGGYADNEIAAISTTGSGEFILRCTLASHSMYMMQSGKTPTESVFAALDNM 141
Query: 354 TARLNNTAGAITLSKNGDVGIHFSFKRMAWAYVKNDKVYYGIEHDQTLEE 205
R+ G I L G+ I S M WA + D +G+ + E
Sbjct: 142 DKRIGGKGGMIVLDCEGNAAIAHSTPHMPWAQRREDVTAFGVYPGDAMAE 191
>SB_8928| Best HMM Match : Ribosomal_L27 (HMM E-Value=5.5)
Length = 121
Score = 87.4 bits (207), Expect = 1e-17
Identities = 43/112 (38%), Positives = 63/112 (56%)
Frame = -1
Query: 543 MVGRIGDTPLIGGGTYADDNVGGISTTGHGESILKYCLAHTIIKLMEGGLDADTATRQAV 364
M GR+GD+P+ G G YA GG STTGHGESI+K LA ++ +E G + + A +
Sbjct: 1 MCGRVGDSPMPGSGGYACKE-GGASTTGHGESIMKVVLAREVVYHLENGKNVNDACANGI 59
Query: 363 NGMTARLNNTAGAITLSKNGDVGIHFSFKRMAWAYVKNDKVYYGIEHDQTLE 208
N M G I++ K+G+ G FS M WA +K V+YG+ + ++
Sbjct: 60 NKMFTLTGGQGGVISIDKHGNYGKAFSTLGMPWAAIKAGDVHYGLSPGEDVQ 111
>SB_47001| Best HMM Match : Asparaginase_2 (HMM E-Value=2.5e-40)
Length = 423
Score = 79.4 bits (187), Expect = 3e-15
Identities = 38/64 (59%), Positives = 47/64 (73%)
Frame = -1
Query: 618 TVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPLIGGGTYADDNVGGISTTGHGESILK 439
TVG VAID G++A TSTGGI+G GR+GD+P+IG G YAD+ + ISTTG GE IL+
Sbjct: 280 TVGAVAIDEFGNVACGTSTGGISGVHPGRVGDSPIIGCGGYADNEIAAISTTGSGEFILR 339
Query: 438 YCLA 427
LA
Sbjct: 340 CTLA 343
>SB_28509| Best HMM Match : Asparaginase_2 (HMM E-Value=1.6e-10)
Length = 198
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/93 (34%), Positives = 52/93 (55%)
Frame = -1
Query: 651 EIGRKDEGGVGTVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPLIGGGTYADDNVGGI 472
+I R + V G VAID+ GHI+ ST G+ K+ GR+GD+P+ G G YAD+ G
Sbjct: 28 DINRTNRLSVLVEGMVAIDSKGHISAGASTNGLAFKIKGRVGDSPMPGAGAYADNEAGAA 87
Query: 471 STTGHGESILKYCLAHTIIKLMEGGLDADTATR 373
+ TG G+ ++++ + ++ M G A +
Sbjct: 88 AATGDGDVMMRFLPTYQAVEYMRQGKSPTEAAK 120
>SB_38156| Best HMM Match : Asparaginase_2 (HMM E-Value=1.5e-32)
Length = 373
Score = 68.5 bits (160), Expect = 5e-12
Identities = 28/63 (44%), Positives = 44/63 (69%)
Frame = -1
Query: 624 VGTVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPLIGGGTYADDNVGGISTTGHGESI 445
VG G V +DA+G++A TST G + K+ GR+GD+P+ G G Y D+ VGG + TG G+ +
Sbjct: 162 VGEDGMVVVDANGNMAGGTSTNGASHKVPGRVGDSPIAGSGAYVDNEVGGAAATGDGDVM 221
Query: 444 LKY 436
+++
Sbjct: 222 MRF 224
>SB_35852| Best HMM Match : Collagen (HMM E-Value=0.18)
Length = 283
Score = 31.5 bits (68), Expect = 0.73
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = -1
Query: 636 DEGGVGTVGPVAIDADGHIAVATSTGGINGKMV---GRIGDTPLIGGGTYADDNVGG 475
++GGVG G V G V GG+N V G GD ++ G DD V G
Sbjct: 2 NDGGVGGDGVVNDGGVGDDGVVNDDGGVNDDSVVNDGVFGDDGVVNYGVVGDDGVFG 58
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 31.1 bits (67), Expect = 0.97
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Frame = -1
Query: 735 QVPPESLISESAKEALNDFLTKGDDQRTEIGRKDEGGVG--TVGPVAIDA---DGHIAVA 571
+V + + + A ++D GDD + D+GGVG G V+ D D I
Sbjct: 59 RVSDDGGVGDDADGRVSDDGGVGDDADGRVS--DDGGVGDNAEGRVSDDGGVGDDAIGRV 116
Query: 570 TSTGGINGKMVGRIGDTPLIG---GGTYADDNVGGISTTGHG 454
+ GG+ VGR+ D +G G +DD GG+ G
Sbjct: 117 SDDGGVGDDGVGRVSDNGGVGDDANGRVSDD--GGVGDDAEG 156
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = -1
Query: 648 IGRKDEGGVGTVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPLIG---GGTYADDNVG 478
+G G V G V DA+G + + GG+ VGR+ D +G G +DD G
Sbjct: 136 VGDDANGRVSDDGGVGDDAEGRV---SDDGGVGDDGVGRVSDYGGVGDDANGRVSDD--G 190
Query: 477 GISTTGHG 454
G+ G
Sbjct: 191 GVGDNAEG 198
>SB_26560| Best HMM Match : 7tm_1 (HMM E-Value=6.3e-09)
Length = 556
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -1
Query: 621 GTVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPLIGGGTYADDNVGG 475
G G A A G A + GG +++G GD I G D +GG
Sbjct: 396 GNGGAFAFQAAGGDVAAVNVGGFGDRVIGCTGDVAAICIGGIGDGAIGG 444
>SB_41062| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31)
Length = 147
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 423 YEPNNTSKLIHRDLLLKSHQHCHQHKYRHQLVACLRYVRPFFHL 554
Y+ N K +KSHQ H + +Q V C ++ + +HL
Sbjct: 5 YQCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYKHSWHL 48
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 423 YEPNNTSKLIHRDLLLKSHQHCHQHKYRHQLVACLRYVRPFFHL 554
Y+ N K +KSHQ H + +Q V C ++ + +HL
Sbjct: 61 YQCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYKHSWHL 104
>SB_6685| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31)
Length = 147
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 423 YEPNNTSKLIHRDLLLKSHQHCHQHKYRHQLVACLRYVRPFFHL 554
Y+ N K +KSHQ H + +Q V C ++ + +HL
Sbjct: 5 YQCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYKHSWHL 48
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 423 YEPNNTSKLIHRDLLLKSHQHCHQHKYRHQLVACLRYVRPFFHL 554
Y+ N K +KSHQ H + +Q V C ++ + +HL
Sbjct: 61 YQCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYKHSWHL 104
>SB_45152| Best HMM Match : DUF320 (HMM E-Value=2.9)
Length = 293
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = -1
Query: 621 GTVGPVAIDADGHIAVATST-GGINGKMVGRIGDTPLI---GGGTYADDN 484
G V + + +G I +ST GG G V + G+TPLI GGG Y D N
Sbjct: 91 GDVIRILVGQEGGINTVSSTSGGGGGSFVAK-GNTPLIVAGGGGGYDDAN 139
>SB_40046| Best HMM Match : TMS_TDE (HMM E-Value=5.5e-07)
Length = 383
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = -1
Query: 705 SAKEALNDFLTKGDDQRTEIGRKDEGGVGTVGPVAIDADGHIAVATS 565
SA + L++GD+ R+++G +EGG G V D DG +A + S
Sbjct: 107 SALDKETTVLSEGDETRSDVGLVEEGGEGR--RVYDDEDGGVAYSYS 151
>SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83)
Length = 242
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 587 PSASIATGPTVPTPPSSFLPISVR 658
P A GPT P+PPS PIS+R
Sbjct: 25 PIAPSPLGPTTPSPPSHHGPISLR 48
>SB_57086| Best HMM Match : PT (HMM E-Value=2.4)
Length = 226
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 423 YEPNNTSKLIHRDLLLKSHQHCHQ--HKYRHQLVACLRYVRPFFHLY-HQCL*QQLYGHQ 593
Y T + H+ +HQ+ HQ H+Y HQ +Y + H Y HQC Y HQ
Sbjct: 119 YPHQYTHQYTHQYTHQYTHQYTHQYTHQYTHQYTH--QYTHQYTHQYTHQC--THPYTHQ 174
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +3
Query: 474 SHQHCHQ--HKYRHQLVACLRYVRPFFHLY-HQCL*QQLYGHQ 593
+HQ+ HQ H+Y HQ Y P+ H Y HQ Q Y HQ
Sbjct: 59 THQYTHQYTHQYTHQYTH--PYTHPYTHQYTHQYTHHQ-YTHQ 98
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +3
Query: 423 YEPNNTSKLIHRDLLLKSHQHCHQ--HKYRHQLVACLRYVRPFFHLYHQCL*QQLYGHQ 593
Y T + H+ +HQ+ HQ H+Y HQ +Y P+ H Y Q HQ
Sbjct: 38 YTHQYTHQYPHQYTHQYTHQYTHQYTHQYTHQYTH--QYTHPYTHPYTHQYTHQYTHHQ 94
>SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39)
Length = 1024
Score = 28.7 bits (61), Expect = 5.2
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = -1
Query: 708 ESAKEALNDFLTKGDDQRTEIGR-KDEGGVGTVGPVAIDADGHIAVATSTGGINGKMVGR 532
++ E +D DD + G D+ GVG VG D D + V NG VG
Sbjct: 76 DNGDENYDDDGGSDDDHDDDNGNYDDDNGVG-VGNY--DDDNGVGVGNYDDD-NGVGVGN 131
Query: 531 IGDTPLIGGGTYADDNVGGI 472
D +G G Y DDN G+
Sbjct: 132 YDDDNGVGVGNYDDDNGVGV 151
>SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17)
Length = 1860
Score = 28.3 bits (60), Expect = 6.8
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = -1
Query: 648 IGRKDEGGVGTVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPLIGG---GTYADDNVG 478
I D+G V G +A+D G +A GGI G + D I G ADD G
Sbjct: 543 IAADDDGDVADDGGIAVDHGGDVA---DDGGIAADHDGDVADDGGIAADDDGDVADD--G 597
Query: 477 GISTTGHGE 451
GI+ G+
Sbjct: 598 GIAADDDGD 606
Score = 27.9 bits (59), Expect = 9.0
Identities = 25/78 (32%), Positives = 32/78 (41%)
Frame = -1
Query: 693 ALNDFLTKGDDQRTEIGRKDEGGVGTVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPL 514
A +D DD D G V G +A D DG +A GGI G + D
Sbjct: 486 AADDDGIAADDDGDVADDVDHGDVADDGGIAADDDGDVA---DDGGIAADDDGDVAD--- 539
Query: 513 IGGGTYADDNVGGISTTG 460
GG ADD+ G ++ G
Sbjct: 540 -DGGIAADDD-GDVADDG 555
>SB_36342| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1)
Length = 872
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -1
Query: 492 DDNVGGISTTGHGESILKYCLAHTIIKLMEGGLDADTATRQAVNGMTARLN 340
+D V ++ TG+ +++ AH+ + L GG + TR NG+ R++
Sbjct: 323 NDAVQVVTPTGNAAFLVQGNTAHSFLSLPTGGRACNELTRTHGNGLLQRMD 373
>SB_2691| Best HMM Match : Luteo_Vpg (HMM E-Value=2.1)
Length = 332
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/62 (30%), Positives = 25/62 (40%)
Frame = -1
Query: 663 DQRTEIGRKDEGGVGTVGPVAIDADGHIAVATSTGGINGKMVGRIGDTPLIGGGTYADDN 484
D+ IG +D + AI DG A+ + GG G G GD + G D
Sbjct: 233 DESVAIGSEDGYAISVDNGDAIGCDGGGAIGGNHGGTIGGNHGDAGDAIVADDGDAGDAI 292
Query: 483 VG 478
VG
Sbjct: 293 VG 294
>SB_36173| Best HMM Match : RVT_1 (HMM E-Value=1.2)
Length = 623
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = -1
Query: 621 GTVGPVAIDADGHI-AVATSTGGINGKMVGRIGDTPLI----GGGT 499
G + + + +G I +VA S GG G V + GDTPL+ GGGT
Sbjct: 89 GDIIKILVGQEGGINSVAKSAGGGGGSFVVK-GDTPLLVAGGGGGT 133
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,837,062
Number of Sequences: 59808
Number of extensions: 384319
Number of successful extensions: 1221
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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