Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0317
         (807 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0448 + 18015609-18016052,18017147-18017248,18017332-180174...    31   1.4  

>10_08_0448 +
           18015609-18016052,18017147-18017248,18017332-18017475,
           18017555-18017705,18017793-18017820,18018456-18018621,
           18018701-18018764,18019320-18019423,18019572-18019710,
           18020114-18020232,18020333-18020485,18020565-18020654,
           18020952-18021029,18021671-18021829,18021914-18022117,
           18022209-18022414,18022495-18022630,18022859-18022898,
           18023329-18023408,18023569-18024228
          Length = 1088

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 210 VTSSIKVAKRKLFRSIGVLNIYILSCQYHSSFCQYC 317
           +  S+ V KR+  RSI +L+IY       +SF Q+C
Sbjct: 511 INKSLSVGKRRTGRSISILDIYGFESFDRNSFEQFC 546


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,459,614
Number of Sequences: 37544
Number of extensions: 255759
Number of successful extensions: 419
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)