Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0314
         (793 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9W2E8 Cluster: CG10320-PA; n=7; Endopterygota|Rep: CG1...    64   4e-09
UniRef50_Q18095 Cluster: Putative uncharacterized protein; n=2; ...    50   7e-05
UniRef50_Q4SNW8 Cluster: Chromosome 15 SCAF14542, whole genome s...    44   0.006
UniRef50_O43676 Cluster: NADH dehydrogenase [ubiquinone] 1 beta ...    43   0.010
UniRef50_UPI00015B52DA Cluster: PREDICTED: similar to NADH dehyd...    42   0.023
UniRef50_UPI0000586C08 Cluster: PREDICTED: similar to NADH dehyd...    39   0.17 
UniRef50_Q09JJ9 Cluster: NADH-dehydrogenase (Ubiquinone) 1 beta-...    36   1.5  
UniRef50_A1ZKY2 Cluster: Sterol desaturase; n=1; Microscilla mar...    35   2.7  

>UniRef50_Q9W2E8 Cluster: CG10320-PA; n=7; Endopterygota|Rep:
           CG10320-PA - Drosophila melanogaster (Fruit fly)
          Length = 110

 Score = 64.1 bits (149), Expect = 4e-09
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = +3

Query: 30  MGGHGHGPPYTVPHYSQFTVKGIPQLDELEKALAVKGLKDPWIR 161
           MGGH HG PYTVPH S + V+ +PQL E+++AL  +GLKDPW+R
Sbjct: 1   MGGH-HGEPYTVPHASTYKVESVPQLVEVKEALGRQGLKDPWLR 43


>UniRef50_Q18095 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 103

 Score = 50.0 bits (114), Expect = 7e-05
 Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +3

Query: 30  MGGHGHGPPYTVPHYSQFT-VKGIPQLDELEKALAVKGLKDPWIR*SITFFHCRY 191
           MGG GH  P+ +P+YS ++  +  PQL + EK LA  GLKDPWIR  +  +  +Y
Sbjct: 1   MGG-GHHEPFKIPNYSIYSNFRDFPQLAQHEKRLAQIGLKDPWIRNYVYLYDRKY 54


>UniRef50_Q4SNW8 Cluster: Chromosome 15 SCAF14542, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 15
           SCAF14542, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 84

 Score = 43.6 bits (98), Expect = 0.006
 Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 30  MGG-HGHGPPYTVPHYSQFTVKGIPQLDELEKALAVKGLKDPWIR 161
           MGG HGHG   ++P + Q+  +G P L+  +K LA +GLKDPW R
Sbjct: 1   MGGDHGHGK-ISMPDWRQWKTEGTP-LEFTQKRLAARGLKDPWAR 43


>UniRef50_O43676 Cluster: NADH dehydrogenase [ubiquinone] 1 beta
           subcomplex subunit 3; n=23; Euteleostomi|Rep: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 -
           Homo sapiens (Human)
          Length = 98

 Score = 42.7 bits (96), Expect = 0.010
 Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 36  GHGHGP-PYTVPHYSQFTVKGIPQLDELEKALAVKGLKDPWIR 161
           GH HG     +P Y Q+ ++G P L+ ++K LA KGL+DPW R
Sbjct: 6   GHEHGHHKMELPDYRQWKIEGTP-LETIQKKLAAKGLRDPWGR 47


>UniRef50_UPI00015B52DA Cluster: PREDICTED: similar to NADH
           dehydrogenase, putative; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to NADH dehydrogenase, putative -
           Nasonia vitripennis
          Length = 109

 Score = 41.5 bits (93), Expect = 0.023
 Identities = 20/44 (45%), Positives = 27/44 (61%)
 Frame = +3

Query: 30  MGGHGHGPPYTVPHYSQFTVKGIPQLDELEKALAVKGLKDPWIR 161
           MGGH H     VP  S + V+    L ++++ LA KGLKDPW+R
Sbjct: 1   MGGHHHVKLPNVPDPSIYKVEDAKDLLKVQERLAKKGLKDPWMR 44


>UniRef50_UPI0000586C08 Cluster: PREDICTED: similar to NADH
           dehydrogenase, putative; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to NADH
           dehydrogenase, putative - Strongylocentrotus purpuratus
          Length = 89

 Score = 38.7 bits (86), Expect = 0.17
 Identities = 13/33 (39%), Positives = 25/33 (75%)
 Frame = +3

Query: 63  VPHYSQFTVKGIPQLDELEKALAVKGLKDPWIR 161
           +P +  + V+ +P+L  +++ LA++GLKDPW+R
Sbjct: 8   IPDWRIYKVEDVPKLKAVQEKLALRGLKDPWLR 40


>UniRef50_Q09JJ9 Cluster: NADH-dehydrogenase (Ubiquinone) 1
           beta-subcomplex 3; n=1; Argas monolakensis|Rep:
           NADH-dehydrogenase (Ubiquinone) 1 beta-subcomplex 3 -
           Argas monolakensis
          Length = 102

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 14/43 (32%), Positives = 27/43 (62%)
 Frame = +3

Query: 63  VPHYSQFTVKGIPQLDELEKALAVKGLKDPWIR*SITFFHCRY 191
           +P    + V+ +P+L ++++ LA  GLKDPW+R  +  F  ++
Sbjct: 13  IPDPKIYKVEDVPRLMQVKRELASYGLKDPWLRNEVWKFQLQH 55


>UniRef50_A1ZKY2 Cluster: Sterol desaturase; n=1; Microscilla marina
           ATCC 23134|Rep: Sterol desaturase - Microscilla marina
           ATCC 23134
          Length = 259

 Score = 34.7 bits (76), Expect = 2.7
 Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
 Frame = -2

Query: 696 IKYGIVTLFFMSILGISSF*VTITQNNYTLLCNNINIYLF-KLNESFPTITLLNRIYICF 520
           IKY + T+F  SI+ IS     ++   YTL+ ++I++Y +  L  SFP + +++  Y  +
Sbjct: 62  IKYSLSTMFIFSIIAIS----ILSFKEYTLIYHDISLYGWGYLLASFPLMVIIHDTYFYW 117

Query: 519 KARL 508
             RL
Sbjct: 118 THRL 121


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,586,977
Number of Sequences: 1657284
Number of extensions: 13799234
Number of successful extensions: 27965
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27956
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67496806780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)