Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0314
         (793 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1164 + 28104181-28104272,28104359-28104989                       28   9.8  
02_05_0031 - 25215587-25216145,25218108-25218133,25218262-252184...    28   9.8  

>06_03_1164 + 28104181-28104272,28104359-28104989
          Length = 240

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 29  NGWSRTWAPVHSASLLPVYCQR 94
           NGW R WA   S +++ V C R
Sbjct: 146 NGWRRVWAEGDSKAVVDVVCDR 167


>02_05_0031 -
           25215587-25216145,25218108-25218133,25218262-25218486,
           25219809-25220111
          Length = 370

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 29  NGWSRTWAPVHSASLLPVYCQR 94
           NGW R WA   S +++ V C R
Sbjct: 276 NGWRRVWAEGDSKTVVDVVCDR 297


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,748,741
Number of Sequences: 37544
Number of extensions: 346590
Number of successful extensions: 652
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)