Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0314
         (793 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70034-4|CAA93855.1|  103|Caenorhabditis elegans Hypothetical pr...    50   2e-06
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z68011-5|CAB60293.1|  332|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z68004-10|CAB60291.1|  332|Caenorhabditis elegans Hypothetical p...    28   6.7  

>Z70034-4|CAA93855.1|  103|Caenorhabditis elegans Hypothetical
           protein C18E9.4 protein.
          Length = 103

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +3

Query: 30  MGGHGHGPPYTVPHYSQFT-VKGIPQLDELEKALAVKGLKDPWIR*SITFFHCRY 191
           MGG GH  P+ +P+YS ++  +  PQL + EK LA  GLKDPWIR  +  +  +Y
Sbjct: 1   MGG-GHHEPFKIPNYSIYSNFRDFPQLAQHEKRLAQIGLKDPWIRNYVYLYDRKY 54


>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
            C06B8.7 protein.
          Length = 3118

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 621  NNYTLLCNNINIYLFKLNESFPTITLLNRIYICFKARLE 505
            N Y+L   +I  Y+   N+  P ITLLN  +  FK + E
Sbjct: 916  NRYSLASIDIEPYMAACNQRMPYITLLNGAFRQFKKQSE 954


>Z68011-5|CAB60293.1|  332|Caenorhabditis elegans Hypothetical
           protein T21B6.5 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/79 (22%), Positives = 34/79 (43%)
 Frame = -2

Query: 756 LSMCFIRKIGTFYIKYAKICIKYGIVTLFFMSILGISSF*VTITQNNYTLLCNNINIYLF 577
           + +C + + G+F  KY K   K  I     + +L +S   V +   N  L   N+ +  +
Sbjct: 71  IGICLVLRWGSFKTKYLKTFSKLDINFETCIDVLPLSIVFVAMISFN-NLCLRNVGVAFY 129

Query: 576 KLNESFPTITLLNRIYICF 520
            +  S  T+  +   Y+ F
Sbjct: 130 YVGRSITTVFTVILTYVFF 148


>Z68004-10|CAB60291.1|  332|Caenorhabditis elegans Hypothetical
           protein T21B6.5 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/79 (22%), Positives = 34/79 (43%)
 Frame = -2

Query: 756 LSMCFIRKIGTFYIKYAKICIKYGIVTLFFMSILGISSF*VTITQNNYTLLCNNINIYLF 577
           + +C + + G+F  KY K   K  I     + +L +S   V +   N  L   N+ +  +
Sbjct: 71  IGICLVLRWGSFKTKYLKTFSKLDINFETCIDVLPLSIVFVAMISFN-NLCLRNVGVAFY 129

Query: 576 KLNESFPTITLLNRIYICF 520
            +  S  T+  +   Y+ F
Sbjct: 130 YVGRSITTVFTVILTYVFF 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,012,593
Number of Sequences: 27780
Number of extensions: 339537
Number of successful extensions: 728
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)