BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0314 (793 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 25 1.1 DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 24 1.9 DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 3.3 DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 3.3 DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 3.3 DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 3.3 DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 4.3 AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 5.7 AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 5.7 AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 7.5 DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 9.9 DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 9.9 DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 9.9 DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 9.9 DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 9.9 DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 9.9 >DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor 2 protein. Length = 581 Score = 24.6 bits (51), Expect = 1.1 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = +2 Query: 47 WAPVHSASLLPVYCQ 91 WAP H+ LL VY Q Sbjct: 298 WAPFHAQRLLAVYAQ 312 >DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR protein. Length = 381 Score = 23.8 bits (49), Expect = 1.9 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = +2 Query: 47 WAPVHSASLLPVYCQ 91 WAP H+ LL VY Q Sbjct: 283 WAPFHTQRLLYVYAQ 297 >DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 23.0 bits (47), Expect = 3.3 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = -1 Query: 556 NNNFTEQNLYLF*S*ARGYNKTIYHNSN 473 +NN N Y + YNK +Y+N N Sbjct: 86 SNNTIHNNNYKYNYNNNNYNKKLYYNIN 113 >DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 23.0 bits (47), Expect = 3.3 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = -1 Query: 556 NNNFTEQNLYLF*S*ARGYNKTIYHNSN 473 +NN N Y + YNK +Y+N N Sbjct: 86 SNNTIHNNNYKYNYNNNNYNKKLYYNIN 113 >DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 23.0 bits (47), Expect = 3.3 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = -1 Query: 556 NNNFTEQNLYLF*S*ARGYNKTIYHNSN 473 +NN N Y + YNK +Y+N N Sbjct: 86 SNNTIHNNNYKYNYNNNNYNKKLYYNIN 113 >DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 23.0 bits (47), Expect = 3.3 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = -1 Query: 556 NNNFTEQNLYLF*S*ARGYNKTIYHNSN 473 +NN N Y + YNK +Y+N N Sbjct: 86 SNNTIHNNNYKYNYNNNNYNKKLYYNIN 113 >DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex determiner protein. Length = 182 Score = 22.6 bits (46), Expect = 4.3 Identities = 9/28 (32%), Positives = 15/28 (53%) Frame = -1 Query: 556 NNNFTEQNLYLF*S*ARGYNKTIYHNSN 473 +NN+ N + + YNK +Y+N N Sbjct: 86 SNNYNYSNYNNYNNNYNNYNKKLYYNIN 113 >AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 22.2 bits (45), Expect = 5.7 Identities = 7/11 (63%), Positives = 10/11 (90%) Frame = -1 Query: 634 NYNSKQLYFTL 602 NYNSK+LY+ + Sbjct: 317 NYNSKKLYYNI 327 >AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 5.7 Identities = 7/11 (63%), Positives = 10/11 (90%) Frame = -1 Query: 634 NYNSKQLYFTL 602 NYNSK+LY+ + Sbjct: 328 NYNSKKLYYNI 338 >AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate receptor 1 protein. Length = 953 Score = 21.8 bits (44), Expect = 7.5 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = -1 Query: 715 KICKNMHKIWHSYIVLYEYIRHLFLLGN 632 K C + IW + L+E+IR L G+ Sbjct: 316 KNCADSGSIWETGKNLFEFIRKQVLSGS 343 >DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 21.4 bits (43), Expect = 9.9 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -2 Query: 621 NNYTLLCNNIN 589 NNY LC NIN Sbjct: 97 NNYKQLCYNIN 107 >DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 21.4 bits (43), Expect = 9.9 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -2 Query: 621 NNYTLLCNNIN 589 NNY LC NIN Sbjct: 97 NNYKQLCYNIN 107 >DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 21.4 bits (43), Expect = 9.9 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -2 Query: 621 NNYTLLCNNIN 589 NNY LC NIN Sbjct: 97 NNYKQLCYNIN 107 >DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 21.4 bits (43), Expect = 9.9 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -2 Query: 621 NNYTLLCNNIN 589 NNY LC NIN Sbjct: 97 NNYKQLCYNIN 107 >DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 21.4 bits (43), Expect = 9.9 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -2 Query: 621 NNYTLLCNNIN 589 NNY LC NIN Sbjct: 97 NNYKQLCYNIN 107 >DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 21.4 bits (43), Expect = 9.9 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -2 Query: 621 NNYTLLCNNIN 589 NNY LC NIN Sbjct: 97 NNYKQLCYNIN 107 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 214,548 Number of Sequences: 438 Number of extensions: 4609 Number of successful extensions: 24 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 24 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 25003662 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -