Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0311
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.9  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.8  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    22   5.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   5.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 457 LFQYCNIIRIQNF 495
           +F YC ++R+Q F
Sbjct: 504 MFDYCTVLRVQRF 516



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 267  IHFVIQIVGPVVYY 308
            +HF++QI+G V  Y
Sbjct: 1425 LHFLLQIIGGVTTY 1438


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 275 CNTNCRTCCILSLLYAHEKLSNEYFITTCR 364
           CN    TC   S+L +H K  +  +  +CR
Sbjct: 261 CNKCDYTCVNKSMLNSHMKSHSNVYRYSCR 290


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 275 CNTNCRTCCILSLLYAHEKLSNEYFITTCR 364
           CN    TC   S+L +H K  +  +  +CR
Sbjct: 19  CNKCDYTCVNKSMLNSHMKSHSNVYRYSCR 48


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 308 IIYNRSDNLYYKMN*LVLNIIII 240
           + YN ++  YY +N   LN+ I+
Sbjct: 46  LTYNNTNRKYYWLNVCCLNLSIV 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,235
Number of Sequences: 336
Number of extensions: 3458
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)