Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0310
(763 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor Fep1|Sc... 29 0.96
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 28 1.7
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 27 2.9
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 27 3.9
SPAC1B1.04c |||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 5.1
SPCC737.05 |||peroxin Pex28/29|Schizosaccharomyces pombe|chr 3||... 26 5.1
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 26 5.1
SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase |Schi... 26 5.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 6.7
SPAC8C9.14 |prr1||transcription factor Prr1|Schizosaccharomyces ... 26 6.7
SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces p... 26 6.7
>SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor
Fep1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 564
Score = 28.7 bits (61), Expect = 0.96
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 355 AAAPPSEETARPSPYAQHHPPQITLHTRTQKSNGTRKTK 471
++ P S ET + SP PQI T T+ SNGT + +
Sbjct: 115 SSVPSSTET-KASPTPLESKPQIVSDTTTETSNGTSRRR 152
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 134 QRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSAL 286
Q + N+E Q S ++L + KN + E+ +IDY+CD +AL
Sbjct: 333 QAAKAANNSEKQALDSACKELREAVLKNTSVPH-ELANSIIDYVCDALAAL 382
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -2
Query: 231 LEIFLFLGMKGTRSWSFERYICISAFSPSRCRCTRPLAIAGTEAPVAHTAVIA 73
L FL G +G ++ ICI +C+ P+ +AG E + A IA
Sbjct: 1297 LHEFLVQGYQGVDMHTYHNIICILIEKAEKCK-DEPVILAGIEDNITLIAEIA 1348
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 401 PNTILRKSPSTHEHRNQTAPEKQNQPDRPSC*MQPRLR 514
P+++ R S S+ P K N+P +P + PR++
Sbjct: 981 PSSLARSSVSSQRSSTSIIPIKPNKPTKPDHLVAPRVK 1018
>SPAC1B1.04c |||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 604
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +2
Query: 590 EQKPPNFSSSEDHLSMISYVRSRYDQYMYFSINNYHFVALHS 715
+QK +F ++DHL +Y+ + Q+ H ++ HS
Sbjct: 156 QQKTTSFFLADDHLKWFTYLTQEFYQFANIPKLPSHVLSYHS 197
>SPCC737.05 |||peroxin Pex28/29|Schizosaccharomyces pombe|chr
3|||Manual
Length = 264
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 635 MISYVRSRYDQYMYFSINNYHFV 703
M SY S YDQ +YF N YH +
Sbjct: 91 MASY-SSSYDQLLYFRQNYYHHI 112
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 26.2 bits (55), Expect = 5.1
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 590 LPSVWSLPWQRWPL 549
+P W PWQ WP+
Sbjct: 469 IPLDWDRPWQAWPI 482
>SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 542
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 590 EQKPPNFSSSEDHLSMISYVRSRYDQYMYFSINNYHFVALHSEDL 724
+QKPPN S+ H S+ D+ +YF+ ++ F L + +
Sbjct: 273 QQKPPNGISAPKHARCASF-DGDADRIVYFAFGSHSFHLLDGDKI 316
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 331 SVATLRSVAAAPPSEETARPSPYAQHHPP 417
S A V APP T P+P +HHPP
Sbjct: 720 SPAIKPQVTPAPP---TPAPTPAVKHHPP 745
>SPAC8C9.14 |prr1||transcription factor Prr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 539
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 300 LLDNLTLKAP*RRHLAQRRRSP 365
LLDN+ KAP +R+LA +P
Sbjct: 102 LLDNIKRKAPSKRNLANENTAP 123
>SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 25.8 bits (54), Expect = 6.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 107 VPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKN 217
+ A SG DG NA + Y++ +LV F+PKN
Sbjct: 77 IGATVSGWAPGPLDGSNAAWREYITLDVNLVYFVPKN 113
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,942,561
Number of Sequences: 5004
Number of extensions: 56164
Number of successful extensions: 186
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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