Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0309
(848 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21D10.08c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 33 0.039
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 30 0.48
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 29 0.63
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 29 1.1
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 28 1.5
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 27 3.4
SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 27 4.4
SPAC13F5.06c |sec10||exocyst complex subunit Sec10|Schizosacchar... 26 5.9
SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyce... 26 7.8
>SPBC21D10.08c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 33.5 bits (73), Expect = 0.039
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 7/178 (3%)
Frame = +2
Query: 305 NDNWNVVTYLNTNNIQSHLDKVDQLF---EKVNSFCKDFESSKIQFD-CMNA---ISSLQ 463
+D WN+ YLN + LDK+ ++ + N K+ ++ KI+ + C + +SS+
Sbjct: 13 DDGWNLKNYLNIQSTSLCLDKLCNIYTQGQDENEDAKELQAIKIKIEWCKDTSVLLSSIC 72
Query: 464 SQHDNNIKKFASVSYLTSSRQSRSKRGLLDFGGSVLKTFFGTLDSNDGVKFSDAIDQVQS 643
++I F V +++S SKR D+ + T F + ++ +
Sbjct: 73 VMLLDSIHDFL-VQQGKITKESISKR---DYSHEI--TIFNFKYAQQEMQNEKLYHFAKL 126
Query: 644 DEKALAHLMRDNIHVIKSTISTFNNSMLKFSENEKRLNKNLEIINSAFEYIINSTDKF 817
E AL L N H+ +TI + + S +E L+ +E ++ Y +S++KF
Sbjct: 127 LEPALESLKVTNNHITHATI------VGQVSGSEHNLSTAIEQVDVIVNYFYDSSEKF 178
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.9 bits (64), Expect = 0.48
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 1/147 (0%)
Frame = +2
Query: 338 TNNIQSHLDKVDQL-FEKVNSFCKDFESSKIQFDCMNAISSLQSQHDNNIKKFASVSYLT 514
T ++ K+ QL E+ N K+ S D + L+ + + IKK V L
Sbjct: 629 TKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLKLEESNKSLIKKQEDVDSLE 688
Query: 515 SSRQSRSKRGLLDFGGSVLKTFFGTLDSNDGVKFSDAIDQVQSDEKALAHLMRDNIHVIK 694
+ Q+ + D S F L++ + + D + +A + + ++ K
Sbjct: 689 KNIQTLKE----DLRKSEEALRFSKLEAKNLREVIDNLKGKHETLEAQRNDLHSSLSDAK 744
Query: 695 STISTFNNSMLKFSENEKRLNKNLEII 775
+T + ++ + K SE+ KRL N+E +
Sbjct: 745 NTNAILSSELTKSSEDVKRLTANVETL 771
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 29.5 bits (63), Expect = 0.63
Identities = 24/85 (28%), Positives = 41/85 (48%)
Frame = +2
Query: 518 SRQSRSKRGLLDFGGSVLKTFFGTLDSNDGVKFSDAIDQVQSDEKALAHLMRDNIHVIKS 697
S+ + ++ LLD ++ FF ++ + V F I V D A +M D H+++
Sbjct: 1414 SKYNLAEIPLLDSKKVPIQIFFLQGENKNYVLF--CIHHVLYDAWAFQLIMDDINHLLRK 1471
Query: 698 TISTFNNSMLKFSENEKRLNKNLEI 772
+ SMLKF R NKN+++
Sbjct: 1472 ENPKGSQSMLKFISYLHRYNKNVDL 1496
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 1.1
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 464 SQHDNNIKKFASVSYLTSSRQSRSKRGLLDFGGSVLKTFFGTLDSNDGVKFSDA-IDQVQ 640
+ ++NN + V+ L + SRSKR L F ++ F ++SN V DA I + +
Sbjct: 647 NSYNNNSSSLSPVNTLANQAHSRSKR-YLPF---IVDDVFEDMESNLRVPTEDAKIKRFK 702
Query: 641 SDEKALAHLMRDNI 682
SD ++ + R N+
Sbjct: 703 SDYRSCIYNARRNV 716
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 28.3 bits (60), Expect = 1.5
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 6/139 (4%)
Frame = +2
Query: 416 SSKIQFDCMNAISSLQSQHDNNIKKFASVSYLT-SSRQSRSKRGLLDFGGSVLKTFF--G 586
+SKI + +N++ N K + + K+GL F LK F
Sbjct: 61 NSKILTELINSVKRPNKPDQNEEKSAVGIEEKSFKDEHLAQKKGLHHFAD--LKEIFLNK 118
Query: 587 TLDSNDGVKFSDAIDQVQS---DEKALAHLMRDNIHVIKSTISTFNNSMLKFSENEKRLN 757
L + DG++ + D +QS D ++ R + + + S+ + EN LN
Sbjct: 119 NLSTLDGLQDASLHDNIQSGKLDNPVISQNRRIVLEKLANPNSSKEYETIPTVENRHPLN 178
Query: 758 KNLEIINSAFEYIINSTDK 814
K + A+E IN D+
Sbjct: 179 KLSKTKTLAYEETINQLDE 197
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 644 DEKALAHLMRDNIHVIKSTISTFNNSMLKFSENEKRLNKNLEIINSAFEY 793
D + + M NI + +NS++ NE++LN +L + N+ Y
Sbjct: 75 DSSSSLNTMESNIEKVNGLFPN-DNSVIALKPNEEKLNSSLSVENNDSTY 123
>SPAC1002.10c |sgt1||SGT1 family transcriptional regulator
Sgt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 26.6 bits (56), Expect = 4.4
Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 2/154 (1%)
Frame = +2
Query: 335 NTNNIQSHLDKVDQLFEK-VNSFCKDF-ESSKIQFDCMNAISSLQSQHDNNIKKFASVSY 508
+T+ + + D++++L EK +NSFC DF + + FD + ++L + + S
Sbjct: 347 DTSFMNVNPDELEELLEKKLNSFCDDFGDDERSGFDNTDHDNTLVGEEEMVPGNHGGKSI 406
Query: 509 LTSSRQSRSKRGLLDFGGSVLKTFFGTLDSNDGVKFSDAIDQVQSDEKALAHLMRDNIHV 688
+++ K+ +F S LK + I+ +DE + H R++ +
Sbjct: 407 NEEITKNKQKQ---NFNESDLK------------NMASRIETFINDEASNNH--REDFYG 449
Query: 689 IKSTISTFNNSMLKFSENEKRLNKNLEIINSAFE 790
+K++ + ++ L S++E LN+N I F+
Sbjct: 450 VKNSDTDTDSDSLADSDDEIFLNRNQGIDEVEFD 483
>SPAC13F5.06c |sec10||exocyst complex subunit
Sec10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 26.2 bits (55), Expect = 5.9
Identities = 22/121 (18%), Positives = 53/121 (43%)
Frame = +2
Query: 431 FDCMNAISSLQSQHDNNIKKFASVSYLTSSRQSRSKRGLLDFGGSVLKTFFGTLDSNDGV 610
++ N S S D +IK FA+ + + +SR + D+ + + N+
Sbjct: 38 YETQNDGSKKLSSIDGSIKSFAACLHELNRLKSRVGDRIRDYASASKQV------QNEYH 91
Query: 611 KFSDAIDQVQSDEKALAHLMRDNIHVIKSTISTFNNSMLKFSENEKRLNKNLEIINSAFE 790
+ S+ + + + L+ + DN++ ++S + + + N KR+ + E++ E
Sbjct: 92 QKSNHLREKFAQVLELSRHLEDNVNDMRSGLVDAGQELERAENNRKRILSSAELLRYYLE 151
Query: 791 Y 793
+
Sbjct: 152 F 152
>SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 459
Score = 25.8 bits (54), Expect = 7.8
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 362 DKVDQLFEKVNSFCKDFESSKIQFDCMNAISSLQSQHDNNIKKFASVSYLTSSRQSRSKR 541
D+++ EKVNS I D + S ++ + + +++ VSY + Q+ +K
Sbjct: 158 DQINAFIEKVNSLRSGSVPFTITVDDITGNSWIEMKPGRDGDRWSQVSYKRTLEQN-TKL 216
Query: 542 GLLD 553
GL+D
Sbjct: 217 GLVD 220
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,042,450
Number of Sequences: 5004
Number of extensions: 59080
Number of successful extensions: 187
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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