Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0309
         (848 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC060803-1|AAH60803.1|  715|Homo sapiens chromosome 6 open readi...    39   0.020
AL590543-3|CAI10943.1|  722|Homo sapiens chromosome 6 open readi...    39   0.020
AL359494-1|CAH71980.1|  722|Homo sapiens chromosome 6 open readi...    39   0.020
AK026958-1|BAB15602.1|  715|Homo sapiens protein ( Homo sapiens ...    39   0.020
BC063480-1|AAH63480.1|  433|Homo sapiens CASC4 protein protein.        31   7.0  
AY358086-1|AAQ88453.1|  380|Homo sapiens VGFG2573 protein.             31   7.0  

>BC060803-1|AAH60803.1|  715|Homo sapiens chromosome 6 open reading
           frame 97 protein.
          Length = 715

 Score = 39.1 bits (87), Expect = 0.020
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
 Frame = +2

Query: 224 CTSHQIITQITDSPGLYYDRLSDVKFTNDNWNVVTYLN-TNNIQSHLDKVDQLFEKVNSF 400
           CTSH  +   + +P   YD LS+V  T +  N   Y N   N +S L      FE   S 
Sbjct: 5   CTSHIALGAASPAPEETYDHLSEVPVTREQLN--HYRNVAQNARSELAATLVKFECAQSE 62

Query: 401 CKDFESSKI--QFDCMNAISSLQSQHDNNIKKFASVSYLTSSR 523
            +D  S  +  +  C    + ++S  +NN +K    S LTS R
Sbjct: 63  LQDLRSKMLSKEVSCQELKAEMESYKENNARK---SSLLTSLR 102


>AL590543-3|CAI10943.1|  722|Homo sapiens chromosome 6 open reading
           frame 97 protein.
          Length = 722

 Score = 39.1 bits (87), Expect = 0.020
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
 Frame = +2

Query: 224 CTSHQIITQITDSPGLYYDRLSDVKFTNDNWNVVTYLN-TNNIQSHLDKVDQLFEKVNSF 400
           CTSH  +   + +P   YD LS+V  T +  N   Y N   N +S L      FE   S 
Sbjct: 5   CTSHIALGAASPAPEETYDHLSEVPVTREQLN--HYRNVAQNARSELAATLVKFECAQSE 62

Query: 401 CKDFESSKI--QFDCMNAISSLQSQHDNNIKKFASVSYLTSSR 523
            +D  S  +  +  C    + ++S  +NN +K    S LTS R
Sbjct: 63  LQDLRSKMLSKEVSCQELKAEMESYKENNARK---SSLLTSLR 102


>AL359494-1|CAH71980.1|  722|Homo sapiens chromosome 6 open reading
           frame 97 protein.
          Length = 722

 Score = 39.1 bits (87), Expect = 0.020
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
 Frame = +2

Query: 224 CTSHQIITQITDSPGLYYDRLSDVKFTNDNWNVVTYLN-TNNIQSHLDKVDQLFEKVNSF 400
           CTSH  +   + +P   YD LS+V  T +  N   Y N   N +S L      FE   S 
Sbjct: 5   CTSHIALGAASPAPEETYDHLSEVPVTREQLN--HYRNVAQNARSELAATLVKFECAQSE 62

Query: 401 CKDFESSKI--QFDCMNAISSLQSQHDNNIKKFASVSYLTSSR 523
            +D  S  +  +  C    + ++S  +NN +K    S LTS R
Sbjct: 63  LQDLRSKMLSKEVSCQELKAEMESYKENNARK---SSLLTSLR 102


>AK026958-1|BAB15602.1|  715|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23305 fis, clone HEP11392. ).
          Length = 715

 Score = 39.1 bits (87), Expect = 0.020
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
 Frame = +2

Query: 224 CTSHQIITQITDSPGLYYDRLSDVKFTNDNWNVVTYLN-TNNIQSHLDKVDQLFEKVNSF 400
           CTSH  +   + +P   YD LS+V  T +  N   Y N   N +S L      FE   S 
Sbjct: 5   CTSHIALGAASPAPEETYDHLSEVPVTREQLN--HYRNVAQNARSELAATLVKFECAQSE 62

Query: 401 CKDFESSKI--QFDCMNAISSLQSQHDNNIKKFASVSYLTSSR 523
            +D  S  +  +  C    + ++S  +NN +K    S LTS R
Sbjct: 63  LQDLRSKMLSKEVSCQELKAEMESYKENNARK---SSLLTSLR 102


>BC063480-1|AAH63480.1|  433|Homo sapiens CASC4 protein protein.
          Length = 433

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = +2

Query: 350 QSHLDKVDQL--FEKVNSFC-KDFESSKIQFDCMNAISSLQSQHDNNIKKFASVSYLTSS 520
           Q  L + DQL  + K N++  K  E     F C   +  L++QH+ NIKK A   +L   
Sbjct: 135 QEFLRQEDQLQDYRKNNTYLVKRLEYES--FQCGQQMKELRAQHEENIKKLAD-QFLEEQ 191

Query: 521 RQSRSK 538
           +Q   K
Sbjct: 192 KQETQK 197


>AY358086-1|AAQ88453.1|  380|Homo sapiens VGFG2573 protein.
          Length = 380

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = +2

Query: 350 QSHLDKVDQL--FEKVNSFC-KDFESSKIQFDCMNAISSLQSQHDNNIKKFASVSYLTSS 520
           Q  L + DQL  + K N++  K  E     F C   +  L++QH+ NIKK A   +L   
Sbjct: 135 QEFLRQEDQLQDYRKNNTYLVKRLEYES--FQCGQQMKELRAQHEENIKKLAD-QFLEEQ 191

Query: 521 RQSRSK 538
           +Q   K
Sbjct: 192 KQETQK 197


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,262,795
Number of Sequences: 237096
Number of extensions: 1631136
Number of successful extensions: 3089
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3089
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)