Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0309
         (848 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10402-10|AAA19064.1|  355|Caenorhabditis elegans Gro-1 operon g...    29   3.2  
AY052770-1|AAL14109.1|  355|Caenorhabditis elegans GOP-2 protein.      29   3.2  
Z95122-2|CAB08355.1|  363|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z48230-2|CAA88264.1|  363|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z48795-7|CAA88731.1|  347|Caenorhabditis elegans Hypothetical pr...    29   5.5  
AF016435-6|AAB65882.1|  213|Caenorhabditis elegans Hypothetical ...    28   7.3  
Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical pr...    28   9.6  
Z49072-1|CAA88884.1|  938|Caenorhabditis elegans Hypothetical pr...    28   9.6  
U41995-10|AAA83466.1|  266|Caenorhabditis elegans Hypothetical p...    28   9.6  
AF031519-1|AAC78763.1|  930|Caenorhabditis elegans myotubularin ...    28   9.6  

>U10402-10|AAA19064.1|  355|Caenorhabditis elegans Gro-1 operon gene
           protein 2 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = -3

Query: 723 IELLNVEIVDFITCILSRIRCAKAFSSDCTWSIASENLTPSLESRVPKNVL 571
           IEL+N    DF  C+L      +AF    TWS +   +T SL S  P  V+
Sbjct: 117 IELINKRSSDFSVCLLDTPGQIEAF----TWSASGSIITDSLASSHPTVVM 163


>AY052770-1|AAL14109.1|  355|Caenorhabditis elegans GOP-2 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = -3

Query: 723 IELLNVEIVDFITCILSRIRCAKAFSSDCTWSIASENLTPSLESRVPKNVL 571
           IEL+N    DF  C+L      +AF    TWS +   +T SL S  P  V+
Sbjct: 117 IELINKRSSDFSVCLLDTPGQIEAF----TWSASGSIITDSLASSHPTVVM 163


>Z95122-2|CAB08355.1|  363|Caenorhabditis elegans Hypothetical
           protein F42G10.2 protein.
          Length = 363

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 12/169 (7%)
 Frame = +2

Query: 260 SPGLYYDRLSDVKFTNDNWNVVTYLNTNNIQSHLDKVDQLFEKVNSFCKDFESSKIQFDC 439
           S  L Y R+  VK +  N NVV ++    +    D +D L +++    +D + S I  D 
Sbjct: 149 SMDLLYKRVYMVKNSRLNENVVGHITVCTV----DALDYLKKELKIIHRDVKPSNILVDG 204

Query: 440 MNAIS------------SLQSQHDNNIKKFASVSYLTSSRQSRSKRGLLDFGGSVLKTFF 583
             A+             S    HD   + + +   +TSS +   +  +   G ++ +   
Sbjct: 205 TGAVKLCDFGICGQLEESFAKTHDAGCQPYLAPERITSSDKYDVRSDVWSLGITLYEIAT 264

Query: 584 GTLDSNDGVKFSDAIDQVQSDEKALAHLMRDNIHVIKSTISTFNNSMLK 730
           G     +     D I  V S +  + H   D+ H     +   N  + K
Sbjct: 265 GKFPYQEWNSLFDQIATVVSGDPPILHPDSDDFHYSLPLVKFINTCLTK 313


>Z48230-2|CAA88264.1|  363|Caenorhabditis elegans Hypothetical
           protein F42G10.2 protein.
          Length = 363

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 12/169 (7%)
 Frame = +2

Query: 260 SPGLYYDRLSDVKFTNDNWNVVTYLNTNNIQSHLDKVDQLFEKVNSFCKDFESSKIQFDC 439
           S  L Y R+  VK +  N NVV ++    +    D +D L +++    +D + S I  D 
Sbjct: 149 SMDLLYKRVYMVKNSRLNENVVGHITVCTV----DALDYLKKELKIIHRDVKPSNILVDG 204

Query: 440 MNAIS------------SLQSQHDNNIKKFASVSYLTSSRQSRSKRGLLDFGGSVLKTFF 583
             A+             S    HD   + + +   +TSS +   +  +   G ++ +   
Sbjct: 205 TGAVKLCDFGICGQLEESFAKTHDAGCQPYLAPERITSSDKYDVRSDVWSLGITLYEIAT 264

Query: 584 GTLDSNDGVKFSDAIDQVQSDEKALAHLMRDNIHVIKSTISTFNNSMLK 730
           G     +     D I  V S +  + H   D+ H     +   N  + K
Sbjct: 265 GKFPYQEWNSLFDQIATVVSGDPPILHPDSDDFHYSLPLVKFINTCLTK 313


>Z48795-7|CAA88731.1|  347|Caenorhabditis elegans Hypothetical
           protein R05H5.1 protein.
          Length = 347

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 723 IELLNVEIVDFITCILSRIRCAKAFSSD 640
           I +LN  + DF TCI+S   C +   SD
Sbjct: 59  IYILNFALFDFATCIISFFSCQQVIFSD 86


>AF016435-6|AAB65882.1|  213|Caenorhabditis elegans Hypothetical
           protein F59D6.7 protein.
          Length = 213

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 25/83 (30%), Positives = 35/83 (42%)
 Frame = +2

Query: 557 GGSVLKTFFGTLDSNDGVKFSDAIDQVQSDEKALAHLMRDNIHVIKSTISTFNNSMLKFS 736
           G  ++  FF TL  +DG   S  +   Q   + LAH     I  +K          L+F+
Sbjct: 81  GDRIIDAFF-TLGDSDGDSKSGQLTFRQF-VRILAHFQP--ISKVKDNALNSRKDKLRFA 136

Query: 737 ENEKRLNKNLEIINSAFEYIINS 805
                LNKN  I    F+ I+NS
Sbjct: 137 FKMYDLNKNNYITREEFKVILNS 159


>Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical
           protein T24A11.1b protein.
          Length = 1006

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = +2

Query: 611 KFSDAIDQVQSDEKALAHLMRDNIHVIKSTISTFNNSMLKFSENEKRLNKNLEIINSAFE 790
           KFS+A+D++  D K  + L+R +    + T   FN   +        +N+N E+  +  E
Sbjct: 226 KFSEAVDELDRDGKLPSWLLRADSVAQEITHIDFNRLGMSEHFQISSVNENFEVCPTYPE 285

Query: 791 YII 799
            II
Sbjct: 286 KII 288


>Z49072-1|CAA88884.1|  938|Caenorhabditis elegans Hypothetical
           protein T24A11.1a protein.
          Length = 938

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = +2

Query: 611 KFSDAIDQVQSDEKALAHLMRDNIHVIKSTISTFNNSMLKFSENEKRLNKNLEIINSAFE 790
           KFS+A+D++  D K  + L+R +    + T   FN   +        +N+N E+  +  E
Sbjct: 222 KFSEAVDELDRDGKLPSWLLRADSVAQEITHIDFNRLGMSEHFQISSVNENFEVCPTYPE 281

Query: 791 YII 799
            II
Sbjct: 282 KII 284


>U41995-10|AAA83466.1|  266|Caenorhabditis elegans Hypothetical
           protein E02C12.9 protein.
          Length = 266

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 701 ISTFNNSMLKFSENEKRLNKNLEIINSAFEYIINSTDKFK*NQ-IYSLF 844
           ISTF+    K S+NEK+     + +   F  + NS+   K  Q +YS+F
Sbjct: 34  ISTFSALGEKLSDNEKKFAGGSDFLERMFSQLFNSSSLQKHFQGMYSVF 82


>AF031519-1|AAC78763.1|  930|Caenorhabditis elegans myotubularin
           homologous protein 1 protein.
          Length = 930

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = +2

Query: 611 KFSDAIDQVQSDEKALAHLMRDNIHVIKSTISTFNNSMLKFSENEKRLNKNLEIINSAFE 790
           KFS+A+D++  D K  + L+R +    + T   FN   +        +N+N E+  +  E
Sbjct: 226 KFSEAVDELDRDGKLPSWLLRADSVAQEITHIDFNRLGMSEHFQISSVNENFEVCPTYPE 285

Query: 791 YII 799
            II
Sbjct: 286 KII 288


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,239,330
Number of Sequences: 27780
Number of extensions: 309647
Number of successful extensions: 971
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)