Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0308
         (772 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330176-1|AAQ16282.1|  179|Anopheles gambiae odorant-binding pr...    26   1.1  
AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding pr...    26   1.1  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   6.0  

>AY330176-1|AAQ16282.1|  179|Anopheles gambiae odorant-binding
           protein AgamOBP49 protein.
          Length = 179

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 248 NRFYFIFHICIANVTKKQALNKMYLNSKI 162
           N F  +FH+C+  +T K   +  +  S+I
Sbjct: 139 NAFALLFHVCVTQITLKHCPDDRWTASEI 167


>AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding
           protein OBPjj6b protein.
          Length = 315

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 248 NRFYFIFHICIANVTKKQALNKMYLNSKI 162
           N F  +FH+C+  +T K   +  +  S+I
Sbjct: 139 NAFALLFHVCVTQITLKHCPDDRWTASEI 167


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 142  YGFFRNRVLIYIFFHYAECRYCA 74
            +GFFR  + I  F    +CR CA
Sbjct: 990  HGFFREYLAINGFTESPDCRSCA 1012


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,201
Number of Sequences: 2352
Number of extensions: 14843
Number of successful extensions: 226
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)