Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0308
         (772 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81503-3|CAB04113.1|  518|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z92827-5|CAB07325.1|  732|Caenorhabditis elegans Hypothetical pr...    28   8.5  
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p...    28   8.5  
AL023830-1|CAA19472.1|  449|Caenorhabditis elegans Hypothetical ...    28   8.5  
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ...    28   8.5  
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ...    28   8.5  

>Z81503-3|CAB04113.1|  518|Caenorhabditis elegans Hypothetical
           protein F14F7.3 protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
 Frame = +3

Query: 450 ISHNISQQFCFGKMLLTLSSGAHCTSMIVQQIS---GAHPKIQAFIFSANDPSLAGSFVL 620
           ++  ++ +   G+  + L +G   T++ +   S     HPK+Q  +    D   A   V 
Sbjct: 305 VTRQLTTEEIVGQCFVFLIAGFDTTALSLSYSSFLLATHPKVQKKLQEEIDRECADPEVT 364

Query: 621 FERLLIIKVCTCSLKHNLK 677
           F++L  +K   C +K  L+
Sbjct: 365 FDQLSKLKYMECVIKETLR 383


>Z92827-5|CAB07325.1|  732|Caenorhabditis elegans Hypothetical
           protein C29F7.6 protein.
          Length = 732

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 485 KNAINIKLGRTLYVHDCPTNFRRAPKDTGFHF 580
           +N I I+ G+TL + D P+  R+AP D    F
Sbjct: 42  ENEIVIEKGKTLTLPDSPSRKRKAPNDESSTF 73


>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 483 GKMLLTLSSGAHCTSMIVQQISGAHPKIQAFIFSAN 590
           G  L T+       S ++ +I+G HP+I+ F+ S N
Sbjct: 837 GDALFTMIVQNFAVSQMISKITGKHPQIKLFLESEN 872


>AL023830-1|CAA19472.1|  449|Caenorhabditis elegans Hypothetical
           protein Y26E6A.1 protein.
          Length = 449

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 661 KEHVQTFIIKRRSKRTNDPASDGSFAEKMKACI 563
           +E ++  ++K RS RT      G F +KM ACI
Sbjct: 358 EETIEKHLVKYRSHRTEVTKLIGLFMDKMLACI 390


>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 483 GKMLLTLSSGAHCTSMIVQQISGAHPKIQAFIFSAN 590
           G  L T+       S ++ +I+G HP+I+ F+ S N
Sbjct: 837 GDALFTMIVQNFAVSQMISKITGKHPQIKLFLESEN 872


>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 483 GKMLLTLSSGAHCTSMIVQQISGAHPKIQAFIFSAN 590
           G  L T+       S ++ +I+G HP+I+ F+ S N
Sbjct: 837 GDALFTMIVQNFAVSQMISKITGKHPQIKLFLESEN 872


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,566,691
Number of Sequences: 27780
Number of extensions: 348546
Number of successful extensions: 794
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)