Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0307
         (847 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:100...    33   0.32 
At4g10170.2 68417.m01665 synaptobrevin-related family protein si...    29   5.1  
At4g10170.1 68417.m01664 synaptobrevin-related family protein si...    29   5.1  
At4g01040.1 68417.m00141 glycosyl hydrolase family 18 protein co...    28   6.8  
At4g19180.1 68417.m02830 nucleoside phosphatase family protein /...    28   9.0  

>At1g28400.1 68414.m03492 expressed protein similar to E6
           (GI:1000090) [Gossypium barbadense]
          Length = 335

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 19/81 (23%), Positives = 33/81 (40%)
 Frame = +2

Query: 554 PEVSDNRQHINNVYVKGPPRTENFNFQNDRIHAEENYQNNQGSYVTQPPEHDRXXNDYYN 733
           P +S+  +  NN     P +TEN+  +    +  E + NN   Y     E      ++ N
Sbjct: 119 PSLSETEESFNNYEENYPKKTENYGTKG---YNNEEFNNNNNKYDANFKE------EFNN 169

Query: 734 QKTDYXIQYSDYNNQNDRGRF 796
            K D      ++NN N+   +
Sbjct: 170 NKYDENYAKEEFNNNNNNNNY 190


>At4g10170.2 68417.m01665 synaptobrevin-related family protein
           similar to Vesicle-associated membrane protein 722
           (AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192)
           {Arabidopsis thaliana}; vesicle-associated membrane
           protein 7B, Arabidopsis thaliana, AF025333
          Length = 254

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/56 (23%), Positives = 26/56 (46%)
 Frame = +2

Query: 635 NDRIHAEENYQNNQGSYVTQPPEHDRXXNDYYNQKTDYXIQYSDYNNQNDRGRFTN 802
           N+ + +    + ++GS  T+ P   R       +  D+ I+  ++   NDRG  T+
Sbjct: 136 NNELKSSNLGEQSEGSNSTKAPLLGRLSKQEKKKGKDHVIELEEHRKSNDRGNITD 191


>At4g10170.1 68417.m01664 synaptobrevin-related family protein
           similar to Vesicle-associated membrane protein 722
           (AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192)
           {Arabidopsis thaliana}; vesicle-associated membrane
           protein 7B, Arabidopsis thaliana, AF025333
          Length = 254

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/56 (23%), Positives = 26/56 (46%)
 Frame = +2

Query: 635 NDRIHAEENYQNNQGSYVTQPPEHDRXXNDYYNQKTDYXIQYSDYNNQNDRGRFTN 802
           N+ + +    + ++GS  T+ P   R       +  D+ I+  ++   NDRG  T+
Sbjct: 136 NNELKSSNLGEQSEGSNSTKAPLLGRLSKQEKKKGKDHVIELEEHRKSNDRGNITD 191


>At4g01040.1 68417.m00141 glycosyl hydrolase family 18 protein
           contains Pfam profile PF00704: Glycosyl hydrolases
           family 18
          Length = 430

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +2

Query: 566 DNRQHINNVYVKGPPRTE 619
           +N+QH+  +YV GPPR+E
Sbjct: 247 NNQQHMQFMYVVGPPRSE 264


>At4g19180.1 68417.m02830 nucleoside phosphatase family protein /
           GDA1/CD39 family protein low similarity to SP|O18956
           Ectonucleoside triphosphate diphosphohydrolase 1 (EC
           3.6.1.5) (Ecto-apyrase) {Bos taurus}; contains Pfam
           profile PF01150: GDA1/CD39 (nucleoside phosphatase)
           family
          Length = 740

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +1

Query: 361 WSNNRRSESILQSKRQQSKQ 420
           WS+ RRS+  LQS+R QS++
Sbjct: 707 WSSPRRSQMRLQSRRSQSRE 726


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,536,101
Number of Sequences: 28952
Number of extensions: 291763
Number of successful extensions: 746
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1960634400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)