Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0306
         (596 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64609-1|AAB04598.1|  405|Caenorhabditis elegans Sperm-specific ...    31   0.62 
U37430-2|AAL08045.2|  802|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z70756-12|CAA94796.2|  180|Caenorhabditis elegans Hypothetical p...    30   1.4  
Z69885-5|CAA93756.2|  882|Caenorhabditis elegans Hypothetical pr...    30   1.4  
AY064464-1|AAL40874.1|  882|Caenorhabditis elegans minibrain kin...    30   1.4  
Z98866-26|CAM33505.1|  559|Caenorhabditis elegans Hypothetical p...    29   2.5  
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical...    29   2.5  
Z70756-10|CAI46587.1|  228|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z31590-8|CAA83465.1|  812|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF518559-1|AAM97343.1|  793|Caenorhabditis elegans inositol poly...    29   3.3  
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr...    28   4.4  
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z70284-9|CAA94280.1|  290|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z79603-3|CAB01892.1|  208|Caenorhabditis elegans Hypothetical pr...    27   7.7  
AF017810-1|AAB70665.1|  208|Caenorhabditis elegans histone H1.1 ...    27   7.7  

>U64609-1|AAB04598.1|  405|Caenorhabditis elegans Sperm-specific
           family, class qprotein 2 protein.
          Length = 405

 Score = 31.1 bits (67), Expect = 0.62
 Identities = 34/130 (26%), Positives = 45/130 (34%), Gaps = 1/130 (0%)
 Frame = -3

Query: 462 PTGAASPSGAIGAWATKRAAGQSTRAT*DHATAGARTAERFFKRCTPPCSRAFAVK*TAR 283
           P G A  + +IGA       G ST      A +GA T            S   AV     
Sbjct: 73  PVGGAPAAVSIGAPPPAGGGGASTMTALGGAPSGASTMTA-VGGAPRGASTMTAVGGVPS 131

Query: 282 SWFTLRVSSGLPSAAKILAGCPGA-NERGPL*LCAPSTGAAATKGVAIWEPHGAAKCPAQ 106
              T+    G P+ A  +    GA     P+     +   A+T       P GA+   A 
Sbjct: 132 GASTMTAVGGAPTGASTMTAVGGAPTGASPMTAFGGAPTGASTMTAVGGAPTGASTMTAV 191

Query: 105 PARPTGAMTL 76
              PTGA T+
Sbjct: 192 GGAPTGASTM 201


>U37430-2|AAL08045.2|  802|Caenorhabditis elegans Hypothetical
           protein K09F5.6 protein.
          Length = 802

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = -1

Query: 482 RVPNPNDQQERPAQVEQ*VHGRPNVRQASRLGRRETTPLQEPEQQNVSS 336
           R+PN +  Q  P   +  V+G   ++Q + L RRE TP Q  +Q ++SS
Sbjct: 664 RIPNVSRIQVTPQGSQIRVNGYGGLQQ-NTLQRREVTPTQHSQQPSLSS 711


>Z70756-12|CAA94796.2|  180|Caenorhabditis elegans Hypothetical
           protein T06E4.10 protein.
          Length = 180

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
 Frame = +2

Query: 53  AAVAVAKPSVIAPVGLAGWAGHLA-APWGSHIATPLVAAAPVLGAHNYRG-PLSLAP 217
           AA A+A     APV  A  A   A AP  + +A+P++AAAP L A +  G P++ AP
Sbjct: 88  AAPALAPAYAPAPVVAAAPAFAPAYAP--APVASPMIAAAPALAAASINGLPVAAAP 142


>Z69885-5|CAA93756.2|  882|Caenorhabditis elegans Hypothetical
           protein T04C10.1 protein.
          Length = 882

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
 Frame = -1

Query: 503 KYESNVQRVPNPNDQQERPAQVEQ*VHG---RPNVRQASRLGRRETTPLQEPEQQNVSSK 333
           ++ ++ Q   NPN Q  +P Q +Q  +    R  + Q  +  + +    Q+  QQ    +
Sbjct: 733 RFSAHQQNYHNPNYQYSQPQQQQQQQYQQTQRTQLEQQQKQAQLQQQLQQQQMQQQQQQQ 792

Query: 332 DAHHHVPELLP*NEQH 285
               H+P+    ++QH
Sbjct: 793 QQRQHMPQAQSSSQQH 808


>AY064464-1|AAL40874.1|  882|Caenorhabditis elegans minibrain kinase
           protein.
          Length = 882

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
 Frame = -1

Query: 503 KYESNVQRVPNPNDQQERPAQVEQ*VHG---RPNVRQASRLGRRETTPLQEPEQQNVSSK 333
           ++ ++ Q   NPN Q  +P Q +Q  +    R  + Q  +  + +    Q+  QQ    +
Sbjct: 733 RFSAHQQNYHNPNYQYSQPQQQQQQQYQQTQRTQLEQQQKQAQLQQQLQQQQMQQQQQQQ 792

Query: 332 DAHHHVPELLP*NEQH 285
               H+P+    ++QH
Sbjct: 793 QQRQHMPQAQSSSQQH 808


>Z98866-26|CAM33505.1|  559|Caenorhabditis elegans Hypothetical
           protein Y49E10.29 protein.
          Length = 559

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = -1

Query: 488 VQRVPNPNDQQERPAQVEQ*VHGRPNVRQAS---RLGRRETTPLQEPEQQNVSSKDAHHH 318
           VQ+ P P  QQ +   V+Q  +  P V+QAS   +    +  P Q P  Q    K A   
Sbjct: 258 VQQAPPPKQQQAQAQPVQQPPNPAPVVQQASAPVQQAPPKPVPQQTPPVQQAPPKPAVQQ 317

Query: 317 VP 312
            P
Sbjct: 318 AP 319


>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
           protein F15E6.1 protein.
          Length = 1655

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 13/55 (23%), Positives = 27/55 (49%)
 Frame = -1

Query: 488 VQRVPNPNDQQERPAQVEQ*VHGRPNVRQASRLGRRETTPLQEPEQQNVSSKDAH 324
           +Q+ P  + +  RP+  ++ +   P  R + R+ +   TP+ EP +  V   D +
Sbjct: 478 IQQRPGASSRAPRPSMAQEDLLRSPTRRLSERVPQEHQTPVLEPRRFQVKVTDTY 532


>Z70756-10|CAI46587.1|  228|Caenorhabditis elegans Hypothetical
           protein T06E4.12 protein.
          Length = 228

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 26/63 (41%), Positives = 31/63 (49%)
 Frame = +2

Query: 53  AAVAVAKPSVIAPVGLAGWAGHLAAPWGSHIATPLVAAAPVLGAHNYRGPLSLAPGQPAN 232
           AA A A P   APV  A  A  LAAP    +A P+   AP++ A   R  L+     PA 
Sbjct: 86  AAPAFAAP---APVFAAPPAPVLAAP-APFLAPPVPPVAPIVSAFAPRPVLAAPAFAPAP 141

Query: 233 ILA 241
           ILA
Sbjct: 142 ILA 144


>Z31590-8|CAA83465.1|  812|Caenorhabditis elegans Hypothetical
           protein R01H10.7 protein.
          Length = 812

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +3

Query: 501 FGKYCTKPKVVFGYVPTNLNKESY 572
           F K   K +V FG VPTNL+  SY
Sbjct: 281 FRKSVEKTRVAFGLVPTNLHIHSY 304


>AF518559-1|AAM97343.1|  793|Caenorhabditis elegans inositol
           polyphosphate-4-phosphataseprotein.
          Length = 793

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +3

Query: 501 FGKYCTKPKVVFGYVPTNLNKESY 572
           F K   K +V FG VPTNL+  SY
Sbjct: 262 FRKSVEKTRVAFGLVPTNLHIHSY 285


>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
           protein B0496.3a protein.
          Length = 1551

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
 Frame = -1

Query: 503 KYESNVQRVPNPNDQQERPAQVEQ*VHGRPNVRQASRLGRR-ETTPLQE------PEQQN 345
           K E    +V +PND  ER  Q+E  +      ++A++   R ET  L+E      PEQQ 
Sbjct: 435 KEEKEKPKVVDPNDPLERLRQIENRLGQNKKDKEAAKTSARVETVKLKEVKKEKSPEQQP 494

Query: 344 VSSKDA 327
              K A
Sbjct: 495 EDPKTA 500


>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
           protein B0496.3b protein.
          Length = 1592

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
 Frame = -1

Query: 503 KYESNVQRVPNPNDQQERPAQVEQ*VHGRPNVRQASRLGRR-ETTPLQE------PEQQN 345
           K E    +V +PND  ER  Q+E  +      ++A++   R ET  L+E      PEQQ 
Sbjct: 435 KEEKEKPKVVDPNDPLERLRQIENRLGQNKKDKEAAKTSARVETVKLKEVKKEKSPEQQP 494

Query: 344 VSSKDA 327
              K A
Sbjct: 495 EDPKTA 500


>Z70284-9|CAA94280.1|  290|Caenorhabditis elegans Hypothetical
           protein K07F5.11 protein.
          Length = 290

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
 Frame = -3

Query: 273 TLRVSSGLPSAAKILAGCPGANERGPL*LCAPS---TGAAATKGVAIWEPHGAAKCPAQP 103
           T+    G PS A  +    GA  RG   + A     TGA+    V    P GA+   A  
Sbjct: 96  TMTALGGAPSGASTMTAVGGA-PRGASTMTAVGGAPTGASTMTAVG-GAPRGASTMTAVG 153

Query: 102 ARPTGAMTLGFATATAAKEHNTTSLI 25
             PTGA T+  A   A  E +T + +
Sbjct: 154 GAPTGASTM-TAVGGAPGEASTMTAV 178


>Z79603-3|CAB01892.1|  208|Caenorhabditis elegans Hypothetical
           protein M163.3 protein.
          Length = 208

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 22/56 (39%), Positives = 26/56 (46%)
 Frame = -3

Query: 255 GLPSAAKILAGCPGANERGPL*LCAPSTGAAATKGVAIWEPHGAAKCPAQPARPTG 88
           G+ S A + A   GAN R       P   AAA K  A  +P  AAK PA   + TG
Sbjct: 91  GVTSKALVQAAGSGANGR----FRVPEKAAAAKKPAAAKKP-AAAKKPAAAKKATG 141


>AF017810-1|AAB70665.1|  208|Caenorhabditis elegans histone H1.1
           protein.
          Length = 208

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 22/56 (39%), Positives = 26/56 (46%)
 Frame = -3

Query: 255 GLPSAAKILAGCPGANERGPL*LCAPSTGAAATKGVAIWEPHGAAKCPAQPARPTG 88
           G+ S A + A   GAN R       P   AAA K  A  +P  AAK PA   + TG
Sbjct: 91  GVTSKALVQAAGSGANGR----FRVPEKAAAAKKPAAAKKP-AAAKKPAAAKKATG 141


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,121,435
Number of Sequences: 27780
Number of extensions: 345571
Number of successful extensions: 1169
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)