Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0305
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.17 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   3.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   3.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   4.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   4.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   6.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 294  DHMNQLGCELHPLMKTTKSH*KGLSTLLKV 383
            D  N+ GC  HPL+KT  +  +G  + + V
Sbjct: 2667 DFKNRCGCGKHPLLKTLNNELRGTPSDISV 2696



 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 294  DHMNQLGCELHPLMKT 341
            D  N  GCE +PL++T
Sbjct: 2169 DFKNLCGCEEYPLLRT 2184


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -2

Query: 352 WLLVVFIKGCNSHPNWFI*SFDNLYTFFILLHGRHLKLKVINCEFR 215
           W  +V I G  +     +  F  +Y  F+LL   ++ LK++  ++R
Sbjct: 134 WCWIVEIGGWLAFTKQLLIKFVEVYPLFVLLIVSNVVLKILVEKYR 179


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 248 MTTM*KYKESV*IVEGSYEPVRV*ITPFDE 337
           + ++ KYK +V +V    EP RV   PF E
Sbjct: 146 LNSLHKYKPTVHLVRVGTEPRRVISFPFPE 175


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = +1

Query: 457 ICLYPTLPLL*NNITKLIYQKYLERIQIRFSN 552
           + ++P +PLL   +  +IY    E++ +  +N
Sbjct: 543 VWIHPWIPLLDTRLQAIIYPIIQEKLGVALTN 574


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 502 KLIYQKYLERIQIRFSNNYVY 564
           KL+ +K+L  +QI   +N ++
Sbjct: 4   KLVVEKFLNSLQIYLQHNQIF 24


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 502 KLIYQKYLERIQIRFSNNYVY 564
           KL+ +K+L  +QI   +N ++
Sbjct: 22  KLVVEKFLNSLQIYLQHNQIF 42


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 400  LPRGIPTFRRVESPFQWLLVVFIK 329
            +P G PT  RVE+  Q  LVV+ K
Sbjct: 994  VPGGPPTSIRVETNDQHSLVVYWK 1017


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,654
Number of Sequences: 336
Number of extensions: 4265
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)