Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0305
         (782 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0787 - 31999632-32000045,32000128-32000214,32000295-320005...    31   1.0  
09_04_0392 + 17251536-17252336                                         30   1.8  
05_07_0014 - 27046329-27046371,27059170-27060017,27060739-27061563     28   7.3  
02_05_0281 + 27441661-27441846,27442919-27443067,27445599-27445737     28   7.3  

>01_06_0787 -
           31999632-32000045,32000128-32000214,32000295-32000584,
           32000670-32000844,32000930-32001142,32001227-32001328,
           32001418-32001822,32001922-32002134,32002312-32002357,
           32002602-32002867,32003936-32004012,32004095-32004170,
           32004339-32004418,32004945-32005036,32005132-32005171,
           32005301-32005400,32005815-32005962,32006071-32006153,
           32006207-32006383
          Length = 1027

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +1

Query: 124 HRYFVERMFLLKTLLKEADSTDQREMRRQAYEIHNLSLL 240
           HR+  E++ +++ L KE+   D+R+ ++   E H  SLL
Sbjct: 368 HRHTAEQIRIMEALFKESPHPDERQRQQAVQERHENSLL 406


>09_04_0392 + 17251536-17252336
          Length = 266

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 758 EHSVGILKYLYIVAGCSEPPHPQIYTGMSG 669
           EHS+ +    Y+V+GC+ PP P+I T   G
Sbjct: 34  EHSIIVAALRYVVSGCTTPP-PEIVTVACG 62


>05_07_0014 - 27046329-27046371,27059170-27060017,27060739-27061563
          Length = 571

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = -2

Query: 325 CNSHPNWFI*SFDNLYTFFILLHGRHLKLKVINCEFRRLVDAFHADP*SQPLSTMFSIKT 146
           CN+HP     ++D   T F   H     + +   EF RL    H+   ++ LS    +  
Sbjct: 369 CNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQG-HSSV-NEYLSQFNKLAR 426

Query: 145 YAPQNIDEE 119
           YAP+ +D +
Sbjct: 427 YAPEEVDTD 435


>02_05_0281 + 27441661-27441846,27442919-27443067,27445599-27445737
          Length = 157

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -2

Query: 358 FQWLLVVFIKGCNSHPNWFI*SFDNLYTFFILLHGRHLK 242
           F WLLV+ + GC     W +    NL+ F I  H  H K
Sbjct: 36  FSWLLVLSVFGCTPGMAWTV---VNLFHFAITYHFFHWK 71


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,465,491
Number of Sequences: 37544
Number of extensions: 355154
Number of successful extensions: 649
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)