Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0305
(782 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83123-6|CAD45601.1| 327|Caenorhabditis elegans Hypothetical pr... 33 0.17
U40934-4|AAA81682.1| 873|Caenorhabditis elegans Vacuolar h atpa... 29 3.7
AF016678-1|AAB66151.1| 159|Caenorhabditis elegans Hypothetical ... 29 3.7
AC024799-2|AAK72317.3| 328|Caenorhabditis elegans Serpentine re... 29 3.7
AB055110-1|BAB62291.1| 873|Caenorhabditis elegans VHA-5 protein. 29 3.7
Z81106-5|CAB03223.3| 432|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL033536-12|CAD45609.2| 432|Caenorhabditis elegans Hypothetical... 28 6.6
AF067217-5|AAO38635.1| 856|Caenorhabditis elegans Hypothetical ... 28 6.6
AF067217-4|AAF99978.1| 887|Caenorhabditis elegans Hypothetical ... 28 6.6
AF000265-2|AAO38667.1| 887|Caenorhabditis elegans Paz/piwi doma... 28 6.6
AF000265-1|AAB52946.2| 913|Caenorhabditis elegans Paz/piwi doma... 28 6.6
>Z83123-6|CAD45601.1| 327|Caenorhabditis elegans Hypothetical
protein T04A11.12 protein.
Length = 327
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +1
Query: 448 SLPICLYPTLPLL*NNITKLIYQKYLERIQIRFS--NNYVYCLMIIS*FQLLCTLLFLAN 621
+LP+ L+ +P+L IT +I + L ++ F NN VY L IS Q +C L FLA+
Sbjct: 30 TLPM-LFLLVPILYIPITIIIILRILVKLYYAFRDRNNNVYLLSAISISQCMCLLFFLAD 88
Query: 622 *SY 630
Y
Sbjct: 89 FLY 91
>U40934-4|AAA81682.1| 873|Caenorhabditis elegans Vacuolar h atpase
protein 5 protein.
Length = 873
Score = 29.1 bits (62), Expect = 3.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 709 QSLHTLRYTLGCLGQMCSYI 650
Q++HT+ Y LGC+ SY+
Sbjct: 755 QAIHTIEYVLGCVSHTASYL 774
>AF016678-1|AAB66151.1| 159|Caenorhabditis elegans Hypothetical
protein K07E8.6 protein.
Length = 159
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 530 EYKLDSLITMCIV**LFLSFSYCAPCYFWPIEVTKKIIK-ENIRTHLSQTSQCISEGVEA 706
E KL +L C+V LFL+ + +F EV++ + + + ++ + +Q E E
Sbjct: 54 EEKLAALSEKCVVFQLFLASATGQKQFFKKFEVSENLDEVKAFKSRMRSRAQAKGEKPEK 113
Query: 707 LNTQQLYINILRFPQNAQEWQKLKE 781
+N Q ++ +F + ++ + LK+
Sbjct: 114 INLNQGTVDSRQFLEELKQLENLKK 138
>AC024799-2|AAK72317.3| 328|Caenorhabditis elegans Serpentine
receptor, class j protein53 protein.
Length = 328
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/51 (25%), Positives = 30/51 (58%)
Frame = +2
Query: 470 QLSHYCKTISLN*STKNILKEYKLDSLITMCIV**LFLSFSYCAPCYFWPI 622
++ + K +++N S K + +++L + + V +F+SFS C C++ P+
Sbjct: 220 KIMYKLKKMTVNASKKTVKLQFELLRALIVQTVIPIFISFSPCLLCWYSPV 270
>AB055110-1|BAB62291.1| 873|Caenorhabditis elegans VHA-5 protein.
Length = 873
Score = 29.1 bits (62), Expect = 3.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 709 QSLHTLRYTLGCLGQMCSYI 650
Q++HT+ Y LGC+ SY+
Sbjct: 755 QAIHTIEYVLGCVSHTASYL 774
>Z81106-5|CAB03223.3| 432|Caenorhabditis elegans Hypothetical
protein R06C1.6 protein.
Length = 432
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 656 RTHLSQTSQCISEGVEALNTQQLYINILRF 745
R L + +C+++G+E+ + QLY +IL F
Sbjct: 389 RIELERQFKCLADGLESRQSPQLYESILNF 418
>AL033536-12|CAD45609.2| 432|Caenorhabditis elegans Hypothetical
protein R06C1.6 protein.
Length = 432
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 656 RTHLSQTSQCISEGVEALNTQQLYINILRF 745
R L + +C+++G+E+ + QLY +IL F
Sbjct: 389 RIELERQFKCLADGLESRQSPQLYESILNF 418
>AF067217-5|AAO38635.1| 856|Caenorhabditis elegans Hypothetical
protein F56A6.1b protein.
Length = 856
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Frame = -3
Query: 432 KVPILYI----KTQSYHVEYLPLEELKVLFNGF 346
KVP L++ KT +H +Y PL EL F GF
Sbjct: 252 KVPSLFMTTEMKTTLFHPDYAPLVELLQTFRGF 284
>AF067217-4|AAF99978.1| 887|Caenorhabditis elegans Hypothetical
protein F56A6.1a protein.
Length = 887
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Frame = -3
Query: 432 KVPILYI----KTQSYHVEYLPLEELKVLFNGF 346
KVP L++ KT +H +Y PL EL F GF
Sbjct: 252 KVPSLFMTTEMKTTLFHPDYAPLVELLQTFRGF 284
>AF000265-2|AAO38667.1| 887|Caenorhabditis elegans Paz/piwi
domain-containing protein1, isoform c protein.
Length = 887
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Frame = -3
Query: 432 KVPILYI----KTQSYHVEYLPLEELKVLFNGF 346
KVP L++ KT +H +Y PL EL F GF
Sbjct: 252 KVPSLFMTTEMKTTLFHPDYAPLVELLQTFRGF 284
>AF000265-1|AAB52946.2| 913|Caenorhabditis elegans Paz/piwi
domain-containing protein1, isoform a protein.
Length = 913
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Frame = -3
Query: 432 KVPILYI----KTQSYHVEYLPLEELKVLFNGF 346
KVP L++ KT +H +Y PL EL F GF
Sbjct: 278 KVPSLFMTTEMKTTLFHPDYAPLVELLQTFRGF 310
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,423,368
Number of Sequences: 27780
Number of extensions: 375829
Number of successful extensions: 759
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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