Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0304
         (800 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    26   0.30 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.93 
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.93 
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.2  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.2  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   5.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.7  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 628 SHSYHWSEIQFLTCLLFFEKCALEFGNFI*SVYNTIIKEK 509
           S S+H +EI     L+FF++ +L   N+   V  T  K +
Sbjct: 53  SKSFHRNEIHIKIVLMFFKEASLYCFNYYVIVVTTFYKRR 92


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 649 ITPNLTVFTNINSYTSCTRPLRWTFKINIIISHS 750
           ITPN     ++  Y S       TF+ N+++ H+
Sbjct: 80  ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHN 113


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 649 ITPNLTVFTNINSYTSCTRPLRWTFKINIIISHS 750
           ITPN     ++  Y S       TF+ N+++ H+
Sbjct: 80  ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHN 113


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 649 ITPNLTVFTNINSYTSCTRPLRWTFKINIIISH 747
           ITPN     ++  Y S       TF+ N+++ H
Sbjct: 80  ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKH 112


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 649 ITPNLTVFTNINSYTSCTRPLRWTFKINIIISH 747
           ITPN     ++  Y S       TF+ N+++ H
Sbjct: 80  ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKH 112


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 649 ITPNLTVFTNINSYTSCTRPLRWTFKINIIISH 747
           ITPN     ++  Y S       TF+ N+++ H
Sbjct: 80  ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKH 112


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 624 IRITGPKFNF*LVCYFLR 571
           IR  G  +NF   CYFLR
Sbjct: 42  IRKNGLNYNFTKKCYFLR 59


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 272 FKLFLIIHIFFV 307
           FKL+ I+HIF +
Sbjct: 25  FKLYTIVHIFII 36


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 466 YVLLLFLIMF*YPVTFPLLLYY 531
           Y LLLF+I   Y +T    +YY
Sbjct: 100 YYLLLFVINVLYVLTLCYAVYY 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,135
Number of Sequences: 336
Number of extensions: 3529
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)