Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0304
         (800 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0609 + 5345761-5345862,5346808-5346871,5346958-5350191,535...    29   3.3  

>08_01_0609 + 5345761-5345862,5346808-5346871,5346958-5350191,
            5350375-5350589,5351123-5351393,5351986-5352161,
            5352287-5352394,5352821-5352930,5354291-5354393,
            5354658-5354828,5354952-5355080,5355322-5355504,
            5355612-5355701,5355823-5355934,5356100-5356227,
            5357769-5357825,5357872-5357923,5358318-5358393,
            5358860-5358950,5359046-5359224,5359563-5359681,
            5359783-5359880
          Length = 1955

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 89   NFQNLEKNIYLYTYMKMNEWN 151
            N   L+ NIY YTY +M  WN
Sbjct: 1734 NGPTLDTNIYGYTYFRMENWN 1754


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,447,794
Number of Sequences: 37544
Number of extensions: 263632
Number of successful extensions: 461
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 461
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)