Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0303
(727 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 4e-27
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 62 6e-10
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 53 2e-07
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 46 4e-05
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 45 7e-05
SB_14803| Best HMM Match : Aldedh (HMM E-Value=4.9e-08) 44 1e-04
SB_32640| Best HMM Match : Aldedh (HMM E-Value=4.9e-08) 44 1e-04
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 44 2e-04
SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12) 42 4e-04
SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08) 37 0.014
SB_52934| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05) 32 0.41
SB_17602| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 31 0.95
SB_6771| Best HMM Match : Aldedh (HMM E-Value=0) 31 0.95
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 29 2.9
SB_28657| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45) 29 5.1
SB_37254| Best HMM Match : Glyco_hydro_2_C (HMM E-Value=0) 28 8.9
SB_47305| Best HMM Match : I-set (HMM E-Value=0) 28 8.9
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 118 bits (285), Expect = 4e-27
Identities = 52/99 (52%), Positives = 74/99 (74%)
Frame = +2
Query: 2 PLALSLLPMAGAIAAGNTVIVKPSEISPASARFIVEYIPKYLDNDAVIIIEGGPQETTKL 181
P+ L LP+ GAIA GN ++KPSE++ A+A+ + + +PKYLD D ++ GG ET +L
Sbjct: 85 PVQLIFLPLVGAIAGGNCAVLKPSEVASATAQLVADLVPKYLDPDCYPVVNGGVPETQQL 144
Query: 182 LSHRFDYIFYTGSTNIGKIIYASAAKHLTPVTLELGGKS 298
L+ +FD IFYTG + +GK++ A+AAK+LT VTLELGGKS
Sbjct: 145 LNQKFDKIFYTGGSAVGKLVMAAAAKNLTRVTLELGGKS 183
Score = 113 bits (273), Expect = 1e-25
Identities = 54/117 (46%), Positives = 79/117 (67%)
Frame = +2
Query: 296 SRLQAVLDASRHKIAIGGKYDPGDKFIDLTILTNVDVNDKIMEDEIFGPLLAICVVKDIN 475
+RL+A+L +R I +GG D +++I TILT V +D +ME+EIFGP+L I V ++
Sbjct: 260 NRLKALL--TRGTIVLGGDTDDKERYISPTILTGVKPSDPVMENEIFGPILPIVSVDSLD 317
Query: 476 EALKFINERGKPLVLYVFSSSEKVHKIFASHTSSGSICFNDTIVFTGVHTLPFGGVG 646
+A+ FIN+R KPL LY+FS+ ++ K +TSSG C ND ++ + TLPFGGVG
Sbjct: 318 DAIDFINDRDKPLALYIFSNKQESIKRIQENTSSGGFCANDVVIHAALETLPFGGVG 374
Score = 37.9 bits (84), Expect = 0.008
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 651 SGIGTYHGKMTYDTFTHRKSCL 716
SG+G YHGK +++ FTH+K C+
Sbjct: 376 SGMGAYHGKHSFEAFTHKKGCM 397
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 63.7 bits (148), Expect = 1e-10
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Frame = +2
Query: 2 PLALSLLPMAGAIAAGNTVIVKPSEISPASARFIVEYIPKY-LDNDAVIIIEG-GPQETT 175
PL ++ + +A A+A GN VI+KP+E +P +A + + + V +I G GP
Sbjct: 480 PLNMASVKIAPALACGNVVILKPAEQTPLTALYFCALVKEAGFPAGVVNVIPGYGPTAGA 539
Query: 176 KLLSH-RFDYIFYTGSTNIGKIIY-ASAAKHLTPVTLELGGKS 298
+ +H D + +TGST +G++I ASA +L +TLELGGKS
Sbjct: 540 AITTHLDIDKVSFTGSTEVGRLIQEASAKSNLKRLTLELGGKS 582
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +2
Query: 344 GGKYDPGDKFIDLTILTNVDVNDKIMEDEIFGPLLAICVVKDINEALKFINERGKPLVLY 523
G ++ FI T+ ++V + +I ++EIFGP+ + K ++E ++ N L
Sbjct: 679 GARHGNKGFFIQPTVFSDVTDDMRIAKEEIFGPVQQLIKFKSVDEVIERANNTTYGLAAG 738
Query: 524 VFSSSEKVHKIFASHTSSGSI 586
VF+ + +S +G++
Sbjct: 739 VFTKNIDTAIAVSSGLRAGTV 759
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 61.7 bits (143), Expect = 6e-10
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Frame = +2
Query: 2 PLALSLLPMAGAIAAGNTVIVKPSEISPASARFIVEYIPKY-LDNDAVIIIEGGPQETTK 178
P+ + +A AIA GNT++ KPS ++P +A + + + + + V II+GG ET +
Sbjct: 423 PIQTACWKIAPAIACGNTIVYKPSPLTPMNAVALADILTEAGVPPGVVNIIQGG-GETGE 481
Query: 179 LLSH--RFDYIFYTGSTNIGKIIYASAAKHLTPVTLELGGKSRLQAVLDA 322
+LS + +TGS G+ I AS A + VTLELGGKS L DA
Sbjct: 482 MLSKDPNVAKVSFTGSVPTGQKIMASCADGIKHVTLELGGKSPLIIFKDA 531
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 416 IMEDEIFGPLLAICVVKDINEALKFINERGKPLVLYVFSSS-EKVHKIFASHTSSGSICF 592
++++EIFGP++ + + EA+ N L +F+ + H++ S +G+ C+
Sbjct: 650 VVKEEIFGPVMTVLTFQTEEEAVTRANNTTFGLAGGIFTRDLNRAHRVIGS-LQAGT-CW 707
Query: 593 NDTIVFTGVHTLPFGG 640
++ T V +PFGG
Sbjct: 708 INSFNITPVE-VPFGG 722
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 53.2 bits (122), Expect = 2e-07
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Frame = +2
Query: 2 PLALSLLPMAGAIAAGNTVIVKPSEISPASARFIVEYIPKYLDNDAV--IIIEGGPQETT 175
P+A+ + + AIA G T+I +PS +P SA + E K D V II+ +
Sbjct: 94 PIAMLVRKASSAIACGCTMIARPSGQTPLSALALGELALKAEIPDGVFNIIVGSSSLISN 153
Query: 176 KLL-SHRFDYIFYTGSTNIGKIIYASAAKHLTPVTLELGGKSRLQAVLDASRHKIAIG 346
KL S + +TGST +G+ +Y +AK L ++LELGG + DA+ K G
Sbjct: 154 KLCDSDIIRKLSFTGSTAVGQDLYQKSAKTLKKLSLELGGNAPFIIFDDANLDKAVSG 211
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 52.8 bits (121), Expect = 3e-07
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Frame = +2
Query: 2 PLALSLLPMAGAIAAGNTVIVKPSEISPASARFIVEYIPKY-LDNDAVIIIEGGPQETTK 178
PL L + A+A GNTV++KP+ + SA E + L ++ G ++
Sbjct: 780 PLMLLCWKVCPALAMGNTVVLKPATYTRLSALLFAEICAEAGLPPGVFNVVTGNGAFGSQ 839
Query: 179 LLSHR-FDYIFYTGSTNIGKIIYASAAKHLTPVTLELGGKSRLQAVLDASRHKIAIGGKY 355
L H D + +TGST +GK++ A ++LELGGKS V D++ A+ G
Sbjct: 840 LAGHPDVDKVAFTGSTEVGKLLRQLTAGSGKKLSLELGGKSPF-VVFDSADLDSAVEGVV 898
Query: 356 D 358
D
Sbjct: 899 D 899
Score = 37.1 bits (82), Expect = 0.014
Identities = 24/100 (24%), Positives = 42/100 (42%)
Frame = +2
Query: 359 PGDKFIDLTILTNVDVNDKIMEDEIFGPLLAICVVKDINEALKFINERGKPLVLYVFSSS 538
P + T++TNV KI+ +E+FGP+L + + EA+ N L V++ +
Sbjct: 982 PSGCYYPPTLITNVQPVSKIVMEEVFGPVLVVLTFRTAKEAVAIANNTNFGLGASVWTEN 1041
Query: 539 EKVHKIFASHTSSGSICFNDTIVFTGVHTLPFGGVGSEWY 658
+ +G++ N +F FGG Y
Sbjct: 1042 LSLAMEVGLSMKAGAVWINGHNLFDA--AAGFGGYRESGY 1079
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 45.6 bits (103), Expect = 4e-05
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Frame = +2
Query: 2 PLALSLLPMAGAIAAGNTVIVKPSEISPASARFIVEYIPKY-LDNDAVIIIEGGPQETTK 178
P A +A A+A GN ++ KP+ PASA + E I + L ++ G +
Sbjct: 154 PTATGAWKIAPALAFGNAIVWKPANQVPASAWALTEIISRQNLPAGTFNLVMGPGADVGD 213
Query: 179 LL--SHRFDYIFYTGSTNIGKIIYASAAKHLTPVTLELGGKSRLQAVLDA 322
++ S + + +TGS G+ + A+ A +L LE+G K+ L + DA
Sbjct: 214 VMINSRGINALTFTGSLETGRKVAAATAVNLVKCQLEMGSKNALIVLDDA 263
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 44.8 bits (101), Expect = 7e-05
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = +2
Query: 332 KIAIGGKYDP-GDKFIDLTILTNVDVNDKIMEDEIFGPLLAICVVKDINEALKFINERGK 508
K+ GG P G+ F + T+LT+V + + ++E FGPL + K EA+ N
Sbjct: 350 KLMRGGHRHPQGENFFEPTVLTDVSPDMLVCKEETFGPLAPLVRFKTEAEAVAIANSTQS 409
Query: 509 PLVLYVFSSS-EKVHKIFASHTSSGSICFNDTIVFTGVHTLPFGG 640
L Y +S +V ++ A G + N++++ T V PFGG
Sbjct: 410 GLAGYFYSQDLSQVWRV-AEALEVGLVGVNESMISTEV--APFGG 451
Score = 44.4 bits (100), Expect = 1e-04
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Frame = +2
Query: 2 PLALSLLPMAGAIAAGNTVIVKPSEISPASARFIVEY-----IPKYLDNDAVIIIEGGPQ 166
PL + A A+AAG TVI+KPSE +P A + + P + N + +
Sbjct: 152 PLGMITRKAAAALAAGCTVIIKPSEETPFCALALQQLAEEAGFPAGVINTIPCSRDRVNE 211
Query: 167 ET-TKLLSHRFDYIFYTGSTNIGKIIYASAAKHLTPVTLELGGKS 298
T T L S + +TGST GKI+ A + ++LELGG +
Sbjct: 212 VTDTVLKSDLVSKMSFTGSTATGKILMAKCVDTVKKMSLELGGNA 256
>SB_14803| Best HMM Match : Aldedh (HMM E-Value=4.9e-08)
Length = 195
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/100 (29%), Positives = 48/100 (48%)
Frame = +2
Query: 308 AVLDASRHKIAIGGKYDPGDKFIDLTILTNVDVNDKIMEDEIFGPLLAICVVKDINEALK 487
A LD I + G Y+ G+ F+ T+L+NV ++EIFGP+L + +A++
Sbjct: 97 ASLDLDGRDIVVKG-YENGN-FVGPTVLSNVTPEMTCYKEEIFGPVLVALNADTLEDAVE 154
Query: 488 FINERGKPLVLYVFSSSEKVHKIFASHTSSGSICFNDTIV 607
IN +F+ S + + FA + G I N +V
Sbjct: 155 IINRNPYGNGTAIFTKSGAIARKFAQKANVGQIGINVPVV 194
>SB_32640| Best HMM Match : Aldedh (HMM E-Value=4.9e-08)
Length = 195
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/100 (29%), Positives = 48/100 (48%)
Frame = +2
Query: 308 AVLDASRHKIAIGGKYDPGDKFIDLTILTNVDVNDKIMEDEIFGPLLAICVVKDINEALK 487
A LD I + G Y+ G+ F+ T+L+NV ++EIFGP+L + +A++
Sbjct: 97 ASLDLDGRDIVVKG-YENGN-FVGPTVLSNVTPEMTCYKEEIFGPVLVALNADTLEDAVE 154
Query: 488 FINERGKPLVLYVFSSSEKVHKIFASHTSSGSICFNDTIV 607
IN +F+ S + + FA + G I N +V
Sbjct: 155 IINRNPYGNGTAIFTKSGAIARKFAQKANVGQIGINVPVV 194
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 43.6 bits (98), Expect = 2e-04
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Frame = +2
Query: 2 PLALSLLPMAGAIAAGNTVIVKPSEISPASARFIVEYIPKYLDNDAVI-IIEG-GPQETT 175
PL L +A A+A+G TV+ KPSE++ +A + E I VI I+ G G + +
Sbjct: 159 PLYLLSFKIAPAVASGCTVVCKPSEMTSVTAWMMAELINDAGFPPGVINIVFGTGSRTGS 218
Query: 176 KLLSH-RFDYIFYTGSTNIGKIIYASAAKHLTPVTLE 283
++ H I +TGST IG++I +A ++LE
Sbjct: 219 AIVQHPDVHLISFTGSTTIGELITKMSAPFCKKLSLE 255
>SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12)
Length = 211
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Frame = +2
Query: 332 KIAIGGKYDPGDK--FIDLTILTNVDVNDKIMEDEIFGPLLAICVVKDINEALKFINERG 505
K+ +GG GDK FI T+ ++V N +I ++EIFGP++ I KD+N+ ++ N+
Sbjct: 98 KLEVGGDR-AGDKGYFIQPTVFSDVQDNMRIAQEEIFGPVMQIFRFKDMNDIIERANKTT 156
Query: 506 KPLVLYVFSSSEKVHKIFASHTSSGSICFNDTIVFTGVHTLPFGG 640
L V + + + + ++ G++ N + PFGG
Sbjct: 157 YGLAGSVMTKNLENALMLSNSLRVGTVWVNCYDALSA--QAPFGG 199
>SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08)
Length = 266
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +2
Query: 365 DKFIDLTILTNVDVNDKIMEDEIFGPLLAICVVKDINEALKFINERGKPLVLYVFSSS 538
+ F+ IL V+ KI E+E FGP++ I KDI E L +++E + +FS +
Sbjct: 123 ESFVYPAILYPVNSTMKIYEEEQFGPVVPILSFKDIQEPLDYVSESNYGQQVSLFSKN 180
>SB_52934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 34.3 bits (75), Expect = 0.10
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Frame = +2
Query: 332 KIAIGGKY-DPGDKFIDLTILTNVDVNDKIMEDEIFGPLLAICVVK--DINEALKFINER 502
K+ GG++ D F + + TNV+ + I ++E FGP++ I D+ L+ N
Sbjct: 128 KLVYGGRHLDRPGFFFEPAVFTNVEDDMFIAKEESFGPVVIISKFDDGDVEGVLESANGT 187
Query: 503 GKPLVLYVFSSSEKVHKIFASHTSSGSICFNDTIVFTGVHTLPFGG 640
L VF+ A +G+ CF +T T V PFGG
Sbjct: 188 EYGLASGVFTKDMSKALRVADALEAGT-CFVNTYNKTDV-AAPFGG 231
>SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05)
Length = 301
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 344 GGKYDPGDKFIDLTILTNVDVNDKIMEDEIFGPLLAICVVKDINEALKF 490
G ++ G+ F + T+LT+V+ + + +E FGPL + + D + F
Sbjct: 220 GHRHPQGENFFEPTVLTDVNQDTLVCMEETFGPLAPLFSLPDNKQVPTF 268
>SB_17602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 31.9 bits (69), Expect = 0.54
Identities = 22/56 (39%), Positives = 25/56 (44%)
Frame = +2
Query: 74 EISPASARFIVEYIPKYLDNDAVIIIEGGPQETTKLLSHRFDYIFYTGSTNIGKII 241
EISP + Y +YL N AVI P T S R Y +Y NIGK I
Sbjct: 234 EISPLIFSLFLTYFCEYLSNHAVITTLAFPNST---FSPRDHYPYYILIYNIGKFI 286
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 31.1 bits (67), Expect = 0.95
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +2
Query: 35 AIAAGNTVIVKPSEISPASARFIVEYI-PKYLDNDAVIIIEGGPQETTKLLSHRFDY--I 205
A+A+GN V++KPS ++P + + + + + V I+ G + ++L+ D +
Sbjct: 175 AMASGNCVVIKPSCLAPLTVHLLAKVLKDSGIPKGVVNIVYGRGEVIGRILARHHDVAAV 234
Query: 206 FYTGSTNIGKIIYASAAKHLTPVTLELG 289
GS + + + V+ ELG
Sbjct: 235 ALVGSERAAFSVTMESGPRVKRVSYELG 262
>SB_6771| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 523
Score = 31.1 bits (67), Expect = 0.95
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Frame = +2
Query: 335 IAIGGKYDPG-DKFIDLTILTNVDVNDKIMEDEIFGPLLAICVVKD--INEALKFINERG 505
+ GG D F++ TI+ + +K+M++EIFGP++ V D E + ++
Sbjct: 375 VLAGGNCDKSVGYFVEPTIVETSNPYNKMMKEEIFGPVVCAYVYPDEKYKEMMDVVDNTN 434
Query: 506 K-PLVLYVFSSSEKV--HKIFASHTSSGSICFNDTIVFTGVHTLPFGG 640
+ L +F A S G+ ND + V PFGG
Sbjct: 435 EFSLTGAIFGEDPTFIEEARDALRESCGNFYVNDKCTGSVVAQQPFGG 482
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 227 IGKIIYASAAK-HLTPVTLELGGKS 298
+G++I +AAK +L VTLELGGKS
Sbjct: 1390 VGRLIQETAAKSNLKRVTLELGGKS 1414
>SB_28657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3296
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 375 INLSPGSYLPPIAILCLLASKTAWRRLLPPSSSVTGV 265
I L PG L P+ + +SK W+ L P+ ++ +
Sbjct: 734 IALQPGIALQPVVLFLFSSSKALWKTLRNPNENIARI 770
>SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45)
Length = 762
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 383 LDL*IYRPDHIYHRLRFYVYLH 318
L L IYRP H +HRL V+LH
Sbjct: 508 LYLNIYRPAHSHHRLPVMVWLH 529
>SB_37254| Best HMM Match : Glyco_hydro_2_C (HMM E-Value=0)
Length = 428
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 145 YDSIIVQILRYIFNDESCTCRRYFTWFHDDG 53
Y I +++ + F D C RY+ W+HD G
Sbjct: 232 YSKIGIRLFQVQFVDV-ILCNRYYAWYHDFG 261
>SB_47305| Best HMM Match : I-set (HMM E-Value=0)
Length = 5832
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 383 TILTNVDVNDKIMEDEIFGPLLAICVVKDINEALKFINERGKP 511
T L N+DVN+K+++ E F + VK EA + +GKP
Sbjct: 617 TALLNLDVNEKVVQPE-FDKEVKPIEVKHGEEATTSLEIKGKP 658
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 26 MAGAIAAGNTVIVKPSEISPASARFIVEYIPKYLDNDAVIIIEGGPQETTKL 181
+ G A G T ++ IS + +F EY+P DN AV ++ GG T L
Sbjct: 8 VVGDGAVGKTCLL----ISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGL 55
>SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1357
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 431 IFGPLLAICVVKDINEALKFI--NERGKPLVLYVFSSSEKVHKIFASHTSSGSICFNDTI 604
I GP V+KD N ALKF+ E G P S + V K+FA + G + D I
Sbjct: 508 IVGPKKETIVLKDANGALKFLIAKEPGMP------SPALFVRKVFAPPSQVGGLEPGDEI 561
Query: 605 V 607
V
Sbjct: 562 V 562
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,751,849
Number of Sequences: 59808
Number of extensions: 511566
Number of successful extensions: 1259
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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