Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0299
         (752 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_47862| Best HMM Match : No HMM Matches (HMM E-Value=.)              98   8e-21
SB_38171| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.020
SB_59351| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_37980| Best HMM Match : 7tm_2 (HMM E-Value=5.3e-13)                 28   7.1  
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_1139| Best HMM Match : wnt (HMM E-Value=0)                          28   7.1  

>SB_47862| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 454

 Score = 97.9 bits (233), Expect = 8e-21
 Identities = 50/116 (43%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
 Frame = +3

Query: 3   QVFINISHKRQSLPTMCSVRRLHYEGIIYRFKFXXXXXXXXXXXXIIGFTLGQVAEGQWK 182
           +VF NI  KR +   M   RRLHYEG+IYRF+F            +I F +  V E QWK
Sbjct: 327 KVFWNIRGKRATFAKMSRARRLHYEGLIYRFEFLMVITLLCAALTVIFFVISNVNEAQWK 386

Query: 183 W-DENIELEYTSAFFTGVYGMWNIYIFALLVLYAPSHKQWPA-VEDTSDTQNLSEE 344
           +  E   +E +SA FTG+YGMWN Y+  L+ LYAPS   + A   ++ DT  L+ E
Sbjct: 387 FGSEESTVEISSALFTGIYGMWNTYVLTLMYLYAPSTGDFAAGYNESRDTVELTGE 442


>SB_38171| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 74

 Score = 36.7 bits (81), Expect = 0.020
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 216 AFFTGVYGMWNIYIFALLVLYAP 284
           A  TG+YGMWN Y+  L+ LY P
Sbjct: 2   ALDTGIYGMWNTYVLTLMYLYEP 24


>SB_59351| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 119

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
 Frame = -1

Query: 371 PLLQWSKFNF---LAQILCIRCILNGWPLLVTRSIQ-NQQCKY 255
           PLL + + N    LA I+C  C+++G  + ++ S++   QCKY
Sbjct: 16  PLLVFKRTNLQRILADIMCASCLISGEMMKMSSSLRTGGQCKY 58


>SB_37980| Best HMM Match : 7tm_2 (HMM E-Value=5.3e-13)
          Length = 1297

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 33  QSLPTMCSVRRLHYEGIIYRFKF 101
           +SL T+   R +HY G++YR +F
Sbjct: 306 KSLQTLMDSRPVHYNGVVYRNRF 328


>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1870

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 273  LYAPSHKQWPAVEDTSDTQNLSEEIEFTPLQE 368
            +Y P +KQW    D+   QN  +  +  P Q+
Sbjct: 1244 MYCPQYKQWGRCSDSWTRQNCQKSCDLCPQQQ 1275


>SB_1139| Best HMM Match : wnt (HMM E-Value=0)
          Length = 500

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -2

Query: 403 RNEVRDEISLDRSCNGVNSISSLKFCVSDVSS 308
           R  V+  +SLD  C+GV+   S++ C   +SS
Sbjct: 330 RRVVKTNMSLDCKCHGVSGSCSVRTCWKSISS 361


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,032,717
Number of Sequences: 59808
Number of extensions: 391119
Number of successful extensions: 687
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)