Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0299
         (752 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1920|AAN11905.1|  562|Drosophila melanogaster CG6210-PB...   170   2e-42
DQ305404-1|ABD58936.1|  594|Drosophila melanogaster wntless isof...   138   8e-33
AY060600-1|AAL28148.1|  594|Drosophila melanogaster GH01813p pro...   138   8e-33
AE014296-1921|AAF50085.2|  594|Drosophila melanogaster CG6210-PA...   138   8e-33

>AE014296-1920|AAN11905.1|  562|Drosophila melanogaster CG6210-PB,
           isoform B protein.
          Length = 562

 Score =  170 bits (413), Expect = 2e-42
 Identities = 84/151 (55%), Positives = 101/151 (66%), Gaps = 11/151 (7%)
 Frame = +3

Query: 3   QVFINISHKRQSLPTMCSVRRLHYEGIIYRFKFXXXXXXXXXXXXIIGFTLGQVAEGQWK 182
           +VF NI  KR SLP+M   RRLHYEG+IYRFKF            + GF +GQ+AEGQW 
Sbjct: 412 KVFRNIGDKRTSLPSMSQARRLHYEGLIYRFKFLMLATLVCAALTVAGFIMGQMAEGQWD 471

Query: 183 WDENIELEYTSAFFTGVYGMWNIYIFALLVLYAPSHKQWPAV----EDTSDTQNL----- 335
           W++N+ ++ TSAF TGVYGMWNIYIFALL+LYAPSHKQWP +    E T   +N+     
Sbjct: 472 WNDNVAIQPTSAFLTGVYGMWNIYIFALLILYAPSHKQWPTMHHSDETTQSNENIVASAA 531

Query: 336 SEEIEFT--PLQERSSEISSLTSFLKKATID 422
           SEEIEF+  P     SEISSLTSF +K   D
Sbjct: 532 SEEIEFSHLPSDSNPSEISSLTSFTRKVAFD 562


>DQ305404-1|ABD58936.1|  594|Drosophila melanogaster wntless isoform
           A protein.
          Length = 594

 Score =  138 bits (334), Expect = 8e-33
 Identities = 68/127 (53%), Positives = 84/127 (66%), Gaps = 11/127 (8%)
 Frame = +3

Query: 75  EGIIYRFKFXXXXXXXXXXXXIIGFTLGQVAEGQWKWDENIELEYTSAFFTGVYGMWNIY 254
           +G+IYRFKF            + GF +GQ+AEGQW W++N+ ++ TSAF TGVYGMWNIY
Sbjct: 468 KGLIYRFKFLMLATLVCAALTVAGFIMGQMAEGQWDWNDNVAIQPTSAFLTGVYGMWNIY 527

Query: 255 IFALLVLYAPSHKQWPAV----EDTSDTQNL-----SEEIEFT--PLQERSSEISSLTSF 401
           IFALL+LYAPSHKQWP +    E T   +N+     SEEIEF+  P     SEISSLTSF
Sbjct: 528 IFALLILYAPSHKQWPTMHHSDETTQSNENIVASAASEEIEFSHLPSDSNPSEISSLTSF 587

Query: 402 LKKATID 422
            +K   D
Sbjct: 588 TRKVAFD 594


>AY060600-1|AAL28148.1|  594|Drosophila melanogaster GH01813p
           protein.
          Length = 594

 Score =  138 bits (334), Expect = 8e-33
 Identities = 68/127 (53%), Positives = 84/127 (66%), Gaps = 11/127 (8%)
 Frame = +3

Query: 75  EGIIYRFKFXXXXXXXXXXXXIIGFTLGQVAEGQWKWDENIELEYTSAFFTGVYGMWNIY 254
           +G+IYRFKF            + GF +GQ+AEGQW W++N+ ++ TSAF TGVYGMWNIY
Sbjct: 468 KGLIYRFKFLMLATLVCAALTVAGFIMGQMAEGQWDWNDNVAIQPTSAFLTGVYGMWNIY 527

Query: 255 IFALLVLYAPSHKQWPAV----EDTSDTQNL-----SEEIEFT--PLQERSSEISSLTSF 401
           IFALL+LYAPSHKQWP +    E T   +N+     SEEIEF+  P     SEISSLTSF
Sbjct: 528 IFALLILYAPSHKQWPTMHHSDETTQSNENIVASAASEEIEFSHLPSDSNPSEISSLTSF 587

Query: 402 LKKATID 422
            +K   D
Sbjct: 588 TRKVAFD 594


>AE014296-1921|AAF50085.2|  594|Drosophila melanogaster CG6210-PA,
           isoform A protein.
          Length = 594

 Score =  138 bits (334), Expect = 8e-33
 Identities = 68/127 (53%), Positives = 84/127 (66%), Gaps = 11/127 (8%)
 Frame = +3

Query: 75  EGIIYRFKFXXXXXXXXXXXXIIGFTLGQVAEGQWKWDENIELEYTSAFFTGVYGMWNIY 254
           +G+IYRFKF            + GF +GQ+AEGQW W++N+ ++ TSAF TGVYGMWNIY
Sbjct: 468 KGLIYRFKFLMLATLVCAALTVAGFIMGQMAEGQWDWNDNVAIQPTSAFLTGVYGMWNIY 527

Query: 255 IFALLVLYAPSHKQWPAV----EDTSDTQNL-----SEEIEFT--PLQERSSEISSLTSF 401
           IFALL+LYAPSHKQWP +    E T   +N+     SEEIEF+  P     SEISSLTSF
Sbjct: 528 IFALLILYAPSHKQWPTMHHSDETTQSNENIVASAASEEIEFSHLPSDSNPSEISSLTSF 587

Query: 402 LKKATID 422
            +K   D
Sbjct: 588 TRKVAFD 594


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,078,225
Number of Sequences: 53049
Number of extensions: 552929
Number of successful extensions: 1113
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)