Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0299
         (752 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83237-6|CAE17879.1|  549|Caenorhabditis elegans Hypothetical pr...    81   6e-16

>Z83237-6|CAE17879.1|  549|Caenorhabditis elegans Hypothetical
           protein R06B9.6 protein.
          Length = 549

 Score = 81.4 bits (192), Expect = 6e-16
 Identities = 53/142 (37%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
 Frame = +3

Query: 3   QVFINISHKRQSLPTMCSV-RRLHYEGIIYRFKFXXXXXXXXXXXXIIGFTLGQVAEGQW 179
           +V+  I  KR +     S  RRL  EG+IYRFKF            I  + + Q  E Q 
Sbjct: 409 RVWSTIKSKRSAQIYQTSENRRLKVEGVIYRFKFLMLFTLLCSAFTIAAYFMKQYGEAQL 468

Query: 180 KWDENIE---LEYTSAFFTGVYGMWNIYIFALLVLYAPSHKQWPAVEDTSDTQNLSEEIE 350
             DE  +      TSAFFTG +GM NIY+  LL +YAPSHK +       D +N  +EI 
Sbjct: 469 HGDEARDGFLTGSTSAFFTGAFGMCNIYVLLLLAMYAPSHKHYRGASQLID-ENDDDEIM 527

Query: 351 FTPLQERSSEISSLTSFLKKAT 416
             P   + +E +++T+FLK +T
Sbjct: 528 EDP-SNQHTESNAMTTFLKPST 548


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,638,690
Number of Sequences: 27780
Number of extensions: 312674
Number of successful extensions: 686
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)