Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0299
         (752 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g04390.1 68417.m00627 Ulp1 protease family protein contains P...    29   4.4  
At1g05680.1 68414.m00589 UDP-glucoronosyl/UDP-glucosyl transfera...    29   4.4  
At5g53620.2 68418.m06662 expressed protein                             28   7.7  
At5g53620.1 68418.m06661 expressed protein                             28   7.7  
At5g24530.1 68418.m02897 oxidoreductase, 2OG-Fe(II) oxygenase fa...    28   7.7  

>At4g04390.1 68417.m00627 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain
          Length = 963

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +3

Query: 198 ELEYTSAFFTGVYGMWNIYIFALLVLYA-PSHKQWPAVEDTSDTQNLSEEIEFTPLQ 365
           E+E  +     V G+  +Y   L+VL A P+ K+ P  EDT  +++  E +E  P Q
Sbjct: 217 EVEQLATTSVDVQGL--LYALQLVVLQAAPAIKEGPVSEDTVCSESDEETLELIPRQ 271


>At1g05680.1 68414.m00589 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 453

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -3

Query: 315 YPQRLAIACDSEHTKPTMQICRCSTFHKLQ*KMLKY 208
           YP  L I  D       + I  C+TF KL+ K+LK+
Sbjct: 184 YPNILRIVVDQLSNIDRVDIVLCNTFDKLEEKLLKW 219


>At5g53620.2 68418.m06662 expressed protein
          Length = 682

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +3

Query: 279 APSHKQWPAVEDTSDTQNL--SEEIEFTPLQERS 374
           APS K+W AV D+ DT +    E+++     ER+
Sbjct: 23  APSRKEWRAVSDSQDTTDYVDLEQLKLNRTDERT 56


>At5g53620.1 68418.m06661 expressed protein
          Length = 682

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +3

Query: 279 APSHKQWPAVEDTSDTQNL--SEEIEFTPLQERS 374
           APS K+W AV D+ DT +    E+++     ER+
Sbjct: 23  APSRKEWRAVSDSQDTTDYVDLEQLKLNRTDERT 56


>At5g24530.1 68418.m02897 oxidoreductase, 2OG-Fe(II) oxygenase
           family protein similar to flavanone 3-hydroxylase
           [Persea americana][GI:727410]; contains PF03171
           2OG-Fe(II) oxygenase superfamily domain
          Length = 341

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 203 GVYFSIFHWSLWNVEHLHICIVGFVCSESQAMAS 304
           GVY S++H ++ N E+  + +  F+C    A+ S
Sbjct: 262 GVYKSVWHRAVTNTENPRLSVASFLCPADCAVMS 295


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,197,927
Number of Sequences: 28952
Number of extensions: 266166
Number of successful extensions: 526
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)