Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0297
         (690 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50311-9|AAA92313.1|  137|Caenorhabditis elegans Hypothetical pr...    27   9.6  
U29535-11|AAK31456.1|  947|Caenorhabditis elegans Hypothetical p...    27   9.6  

>U50311-9|AAA92313.1|  137|Caenorhabditis elegans Hypothetical
           protein C25E10.8 protein.
          Length = 137

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 143 GHTPKTCLIYRCLDNA 190
           G+TPK CL  +C++NA
Sbjct: 39  GYTPKVCLSAQCIENA 54


>U29535-11|AAK31456.1|  947|Caenorhabditis elegans Hypothetical
           protein C25H3.11 protein.
          Length = 947

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 521 IGKKTAFIVLYQVLFLPSTIKPGTILLVVGPLVSPR 628
           +GK T  + +  +   P T+K   +L++VGPL S +
Sbjct: 61  LGKLTLSVPITHIRSEPWTLKLSDVLIIVGPLSSEK 96


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,251,196
Number of Sequences: 27780
Number of extensions: 353913
Number of successful extensions: 785
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)