Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0297
         (690 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    25   0.90 
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   3.6  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   4.8  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 191 KRYLNIGILDKFWECGHFTYSPNKFGRTI 105
           KR +NIGI+    ECG +     K G  I
Sbjct: 361 KRLVNIGIISWGAECGKYPNGNTKVGSYI 389


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 665 FTAEIGKAVVPTRADSQEVLPPVK*FQV*WYLAKITPDIK 546
           F+ EIG A +    +  E L  +  F V + L K  PD+K
Sbjct: 355 FSQEIGLASLGASDEEIEKLSTIYWFTVEFGLCKEGPDVK 394


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 136 RIHPTNSGEQYYAQFFRQNT 77
           R H   SG+++   F+RQ+T
Sbjct: 34  RYHQQISGDRFSKDFYRQDT 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,451
Number of Sequences: 438
Number of extensions: 4559
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)