Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0297
         (690 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g64030.1 68414.m07252 serpin family protein / serine protease...    28   6.7  
At5g09840.1 68418.m01138 expressed protein contains Pfam profile...    27   8.9  

>At1g64030.1 68414.m07252 serpin family protein / serine protease
           inhibitor family protein similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311, serpin [Triticum
           aestivum] GI:871551; contains Pfam profile PF00079:
           Serpin (serine protease inhibitor)
          Length = 385

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +2

Query: 467 SEEILARGTEDTEGSVDFIG--KKTAFIVLYQVLFLPSTIKPGTILLVVGPLVSPRG 631
           +E   A    D   S+DF+   KK  F+  +  LFL    K GT+L  VG +  P G
Sbjct: 318 AEAAAATADGDCGCSLDFVEPPKKIDFVADHPFLFLIREEKTGTVLF-VGQIFDPSG 373


>At5g09840.1 68418.m01138 expressed protein contains Pfam profile
           PF04396: Protein of unknown function, DUF537
          Length = 924

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = -2

Query: 428 EQVLNSGHVIQNESF-LGHDTVLRGQVILKSNIRP-NTSEIHFFVFPPSRL 282
           E+VL S  +++ ES     D +L GQ  +K+N++P  T+++    +  S +
Sbjct: 411 EKVLESDKIVKEESSESSQDPILVGQKDVKANVKPVETNQVALVAWSDSSM 461


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,120,051
Number of Sequences: 28952
Number of extensions: 321234
Number of successful extensions: 679
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)