Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0296
(334 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 24 1.7
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 24 1.7
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 24 1.7
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 23 3.0
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 23 3.0
AY280613-1|AAQ21366.1| 257|Anopheles gambiae carbonic anhydrase... 23 4.0
DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein O-fucosylt... 22 5.3
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 22 7.0
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 21 9.3
AY028783-1|AAK32957.1| 499|Anopheles gambiae cytochrome P450 pr... 21 9.3
AJ297932-1|CAC35452.1| 90|Anopheles gambiae gSG1a protein prot... 21 9.3
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.8 bits (49), Expect = 1.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 131 QFVRMDLDPSHWPFI 87
Q V+MD HWPF+
Sbjct: 551 QAVKMDSGSEHWPFM 565
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 23.8 bits (49), Expect = 1.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 131 QFVRMDLDPSHWPFI 87
Q V+MD HWPF+
Sbjct: 552 QAVKMDSGSEHWPFM 566
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +1
Query: 31 GYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWS 135
G +F KKA +A+++ +W S S+ W+
Sbjct: 892 GESFTETAKKASRQASMRQWQNEW--SNSLNGRWT 924
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 23.0 bits (47), Expect = 3.0
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = +1
Query: 61 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTN 240
A A AA + + + + T TR + ++ PSS + ++P ++ ++PTN
Sbjct: 230 ATAGAAHYSKKSTTVSYQPVPTGTPTRMLNGEPASQ-RPSSSQMQRPKVQQLDTAAAPTN 288
Query: 241 TTVY 252
+Y
Sbjct: 289 HHLY 292
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 134 DQFVRMDLDPSHWPFIAWMAASA 66
DQ + P HWP++ + SA
Sbjct: 41 DQVCCVQRSPPHWPYLLCSSCSA 63
>AY280613-1|AAQ21366.1| 257|Anopheles gambiae carbonic anhydrase
alternate isoform protein.
Length = 257
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +1
Query: 37 AFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRK 144
A + +++ DA+ I A W+G + + ++ T K
Sbjct: 147 AGLQYIRSPDAQTEIDADCLAWMGMQELNRHYYTYK 182
>DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein
O-fucosyltransferase 2 protein.
Length = 451
Score = 22.2 bits (45), Expect = 5.3
Identities = 7/23 (30%), Positives = 10/23 (43%)
Frame = +3
Query: 33 LCFCIICKESRCRSCHPGNEWPV 101
L F CK + +C WP+
Sbjct: 426 LTFNTFCKSEKDMNCEKNTVWPI 448
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 57 ESRCRSCHPGNE 92
E RCR C+ G E
Sbjct: 1014 EDRCRKCNSGGE 1025
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = -1
Query: 271 NLRNR--HSKLWCLSVSFDYKLR 209
+LRN+ + LW FDYKLR
Sbjct: 70 SLRNQVMTTNLWVKQKWFDYKLR 92
>AY028783-1|AAK32957.1| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 217 KLRQMLAVLLSYY 179
+LR MLAVLLS Y
Sbjct: 448 QLRTMLAVLLSSY 460
>AJ297932-1|CAC35452.1| 90|Anopheles gambiae gSG1a protein
protein.
Length = 90
Score = 21.4 bits (43), Expect = 9.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -1
Query: 256 HSKLWCLSVSF 224
HS++WC +SF
Sbjct: 3 HSRVWCCLLSF 13
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.130 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 317,341
Number of Sequences: 2352
Number of extensions: 6311
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23342418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -