Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0295
         (753 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IEB3 Cluster: Putative uncharacterized protein PF13_0...    42   0.022
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    40   0.050
UniRef50_Q5C237 Cluster: SJCHGC04992 protein; n=1; Schistosoma j...    35   2.5  
UniRef50_A4MAP7 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    33   7.6  

>UniRef50_Q8IEB3 Cluster: Putative uncharacterized protein
           PF13_0116; n=4; Plasmodium|Rep: Putative uncharacterized
           protein PF13_0116 - Plasmodium falciparum (isolate 3D7)
          Length = 1258

 Score = 41.5 bits (93), Expect = 0.022
 Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 2/129 (1%)
 Frame = -2

Query: 509 NIGYIFRNSF*TNFDMCHETEKKNR*FISVTGVYKHWLSTYFIRKIGTRLGFEHRCIATR 330
           NI     NS   N    H+  +K    IS+ G+Y  +   + I  I   L   + C    
Sbjct: 368 NIFIYLINSVCANIPSVHKCVEK---IISLDGIYDLYFKNFMINFIYYNLSCVYNCNPLN 424

Query: 329 MRRTSYPLGHIWVVLARYFKQYITV--TEIN*NRDKKRSSVEQCVESDIHGEFLISFTFN 156
           + +      HIW +L +YF  Y  V   +   N+D   +S+ Q   +D   E+   F F+
Sbjct: 425 LGKIMND-EHIWDILVKYFSNYYLVKYKKTKSNKDILSASMNQITPND---EYYKHFDFD 480

Query: 155 YSIPGKINT 129
           Y   GK  T
Sbjct: 481 YIHSGKWRT 489


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 40.3 bits (90), Expect = 0.050
 Identities = 22/31 (70%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
 Frame = +3

Query: 570 SRF*SGGRFCEALLLLGSVLA-TFRFEPREL 659
           SRF S GRFCEALLLLG VLA + R  P EL
Sbjct: 85  SRFRSDGRFCEALLLLGLVLANSLRLSPYEL 115


>UniRef50_Q5C237 Cluster: SJCHGC04992 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC04992 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 219

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -3

Query: 547 KLNELISLMKYMRI*DISLGIVFKRILTCVMKLKK 443
           KLN  I   KY+R  D+ +GI+ K++L   M LKK
Sbjct: 138 KLNVAIHYTKYLRFDDVYIGIILKKLLYVPMHLKK 172


>UniRef50_A4MAP7 Cluster: Putative uncharacterized protein; n=1;
           Petrotoga mobilis SJ95|Rep: Putative uncharacterized
           protein - Petrotoga mobilis SJ95
          Length = 661

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +3

Query: 411 NTGYRNKLSVFFFSFMTHVKIRLKTIPKDISYILMYFIKLMSSLSFSP 554
           NT Y  K+ + FF  +T + I  + I K +S I MY I ++S +  +P
Sbjct: 569 NTVYGTKIFLLFFLSLTILVIFEEKITKFVSLISMYIISILSFIQVTP 616


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = +3

Query: 540 LSFSPDLLSGSRF*SGGRFCEALLLLGSV 626
           LSFSPDLLSGSRF +G  +   +L LG++
Sbjct: 397 LSFSPDLLSGSRFRTGAEY--EMLGLGTI 423


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,130,587
Number of Sequences: 1657284
Number of extensions: 13549845
Number of successful extensions: 25828
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25824
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)