Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0295
         (753 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0156 - 14532000-14532098,14532669-14534330,14534445-145346...    29   3.0  
08_02_0216 + 14390739-14390847,14390983-14391017,14391112-143911...    29   4.0  
04_04_1356 + 32854585-32854832,32854948-32855148,32855270-328554...    29   5.2  
08_02_0099 + 12343518-12343678,12344193-12344393,12344669-123448...    28   6.9  
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477...    28   6.9  
07_03_0976 + 23061633-23061686,23062783-23063564,23065468-230657...    28   6.9  
03_06_0510 + 34423528-34424046,34424132-34425025                       28   6.9  

>12_02_0156 -
           14532000-14532098,14532669-14534330,14534445-14534660,
           14534730-14534907,14535065-14535276
          Length = 788

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +3

Query: 177 ELSMYIRLHTLLYTTPFFISVSIYLCYCYVLFEISRQHHPNVA*RIRRP 323
           E+ MY+ LH L  TTP+ +  ++ +    VLF      H  +  + + P
Sbjct: 707 EMGMYVDLHPLTNTTPYTVVETMSVAKAVVLFRSVALRHMLIMPKFQGP 755


>08_02_0216 +
           14390739-14390847,14390983-14391017,14391112-14391153,
           14391253-14391346,14391476-14391672,14392407-14392424,
           14392938-14393182,14393300-14393657,14393741-14394316,
           14395172-14395447
          Length = 649

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = -3

Query: 634 VASTDPSKSSASQNLPPDQKRDPLRRSGEKLNELIS 527
           +  ++ S+ SAS++  PD +   LR++GE  N ++S
Sbjct: 74  IVFSEESRESASKSTEPDSQEFLLRKAGEHKNRVLS 109


>04_04_1356 +
           32854585-32854832,32854948-32855148,32855270-32855447,
           32856389-32856651,32856800-32857040,32857317-32858456,
           32858856-32858993
          Length = 802

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 177 ELSMYIRLHTLLYTTPFFISVSIYLCYCYVLF-EISRQH 290
           EL M++ LH    T+P+ +  ++ L   +VLF E+  +H
Sbjct: 710 ELEMFVDLHPFTNTSPYTVVETMSLAKAHVLFREVGLRH 748


>08_02_0099 +
           12343518-12343678,12344193-12344393,12344669-12344846,
           12347201-12347463,12347596-12347874,12348045-12349182,
           12349303-12349473
          Length = 796

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 177 ELSMYIRLHTLLYTTPFFISVSIYLCYCYVLF-EISRQH 290
           E+ MY+ LH    T+P+ +  ++ L    VLF E+  +H
Sbjct: 693 EMEMYVDLHPFTNTSPYTVVETMSLAKALVLFREVGLRH 731


>07_03_1291 + 25545749-25546262,25546989-25547669,25547693-25547751,
            25549152-25549242,25549330-25549743,25550191-25550243,
            25550947-25551177,25551492-25551708,25551790-25551890,
            25552446-25552532,25553536-25553676,25553839-25553961,
            25554070-25554522,25554931-25555308,25555410-25556060,
            25556264-25556368,25556482-25556707,25557204-25557241
          Length = 1520

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +3

Query: 420  YRNKLSVFFFSFMTHVKIRLKTIPKDISYILMYFIKL 530
            Y++  SV F S++  + I  +T+P+  S + ++ +KL
Sbjct: 1448 YKSSSSVSFCSYLDDIVIYFQTMPQTTSAVALWVVKL 1484


>07_03_0976 +
           23061633-23061686,23062783-23063564,23065468-23065717,
           23065808-23065984
          Length = 420

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 363 PGIRTPVHRNTNAPDVLSFRPHLGGVGEI 277
           P ++ P H N+   D L +R H+GG  ++
Sbjct: 335 PLVKRPEHHNSEKWDALLYRNHMGGDNQV 363


>03_06_0510 + 34423528-34424046,34424132-34425025
          Length = 470

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -1

Query: 390 VFH*KNWYPPGIRTPVHRNTNAPDVLSFRPHLGGVGEIFQTVHNSN 253
           VFH     P   R P HR    PD +S RP    VG++ + +   N
Sbjct: 55  VFHTHFNAPDAARHPEHRFVAVPDGMSGRPPPVSVGDVVKHIRALN 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,924,005
Number of Sequences: 37544
Number of extensions: 344392
Number of successful extensions: 635
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)