Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0293
(775 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31891| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_31211| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_19356| Best HMM Match : Cucumo_2B (HMM E-Value=7.3) 46 3e-05
SB_27983| Best HMM Match : PAN (HMM E-Value=0.0022) 36 0.036
SB_345| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_27401| Best HMM Match : SCP (HMM E-Value=9e-23) 31 0.78
SB_16622| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 1.0
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042) 30 1.8
SB_37928| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_54044| Best HMM Match : PARP (HMM E-Value=0.078) 30 2.4
SB_24369| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018) 29 5.5
SB_11496| Best HMM Match : DUF408 (HMM E-Value=7.3e-07) 28 7.3
SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_9823| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_57716| Best HMM Match : Phage_fiber_2 (HMM E-Value=4.3) 28 9.6
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 9.6
SB_20796| Best HMM Match : RVT_1 (HMM E-Value=0.047) 28 9.6
SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0) 28 9.6
>SB_31891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 282
Score = 85.8 bits (203), Expect = 3e-17
Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
Frame = +1
Query: 229 ELQTLSEELLRKDTNNAAKYI--TMDFQEKTTSQSKEDKAPLPLLN-ISSAAWNIPTIEK 399
EL + +++ + D+N + +D Q KT S+ D+A PL ++ A PT +
Sbjct: 2 ELSHVCDQMWKADSNRLVPEVDYAIDPQGKTRFHSRSDQASDPLFTWVNPEALRKPTYDA 61
Query: 400 IVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATSVMRHLMNFLKEKGYVTPDPRQQR 579
V LLDNY T E V +E NE F+D I T M FL KG V D +
Sbjct: 62 FVKLLDNYASETGKPEVVNQEEINENRVFIDRIYDTGPMEIAHKFLAGKGLVPSDRPGFK 121
Query: 580 DFVKQLWFSLYSRGKG-KI-SSSGFEHIFVSELK 675
+ Q+WF LY R +G ++ SSGFEH+FV E +
Sbjct: 122 KKLYQMWFELYQRTRGCRVKDSSGFEHVFVGETR 155
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 683 EVSGLHNWIYFSKEEAANRLNYLGYLKYR 769
EV G HNWI F +E A ++Y G+ R
Sbjct: 159 EVIGFHNWIQFYLQEKAGVVDYKGFFPNR 187
>SB_31211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 295 MDFQEKTTSQSKEDKAPLPLLN-ISSAAWNIPTIEKIVPLLDNYERSTLVNEHVTPQERN 471
+ Q T ++D APLPL ++ T + L DNY T EH + QER
Sbjct: 31 ISLQNHTRPSMRDDVAPLPLFTWVNETRLKHTTFSSMEALFDNYFLYTGNKEHESKQERE 90
Query: 472 EENAFMDAIMATSVMRHLMNFL 537
E+ F++A+MAT VM+ N+L
Sbjct: 91 EKKGFIEAVMATDVMKLTHNYL 112
>SB_19356| Best HMM Match : Cucumo_2B (HMM E-Value=7.3)
Length = 194
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +1
Query: 409 LLDNYERSTLVNEHVTPQERNEENAFMDAIMATSVMRHLMNFLKEKGYVTPDPRQQRD 582
L DNY T EH + QER E+ F++A+MAT VM+ N+L + V P R+ RD
Sbjct: 13 LFDNYFLYTGNKEHESKQEREEKKGFIEAVMATDVMKLTHNYLVHERLV-PKSREPRD 69
>SB_27983| Best HMM Match : PAN (HMM E-Value=0.0022)
Length = 616
Score = 35.9 bits (79), Expect = 0.036
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 571 QQRDFVKQLWFSLYSRGKGKISSSGFEHIFVSE 669
Q D + ++WF Y+RG + SSGFEH+FV E
Sbjct: 2 QFEDQLYKIWFYFYNRGAYR-DSSGFEHVFVGE 33
>SB_345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1213
Score = 31.5 bits (68), Expect = 0.78
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +1
Query: 79 AMVSGSNKPTTLSVYTTPKPSTRGPVLPSVILN-NNRNTNTGSDSRSTSDTELQ-TLSEE 252
A V+ S+ TTL V T PKP P + VI+N N+R N ST LS+E
Sbjct: 616 APVTSSDNQTTL-VPTVPKPEFLPPTIYPVIINDNDRAINYWQIPNSTLPRPTWIALSQE 674
Query: 253 LLRKDTNNAAKYITMDFQEKTTSQSKEDKA 342
+ T + D Q+K + ++E K+
Sbjct: 675 EYKVPTIANGTVLPDDVQKKLSQLTEEFKS 704
>SB_27401| Best HMM Match : SCP (HMM E-Value=9e-23)
Length = 1105
Score = 31.5 bits (68), Expect = 0.78
Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 7/132 (5%)
Frame = +1
Query: 175 NNNRNTNTGSDSRSTSDTELQTLSEELLRKDTNNAAKYITMDFQEKTTSQSKED------ 336
NNN N N ++ ++T+ T + T AA IT ++ TT Q +
Sbjct: 38 NNNNNNNGNNNGKTTTAATTTTTTTTTTTTATTTAAAAITTTTEDGTTGQGPQRFFTVTS 97
Query: 337 -KAPLPLLNISSAAWNIPTIEKIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATSV 513
AP+ + N+P+++ + L R T +F + +
Sbjct: 98 INAPIGVRRNDDVMMNMPSVQHLFGTLKTSPREDYDFPRRTVDLHKASRSFGNNLQRLRS 157
Query: 514 MRHLMNFLKEKG 549
+++ LK+ G
Sbjct: 158 KEYMIANLKKNG 169
>SB_16622| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1239
Score = 31.1 bits (67), Expect = 1.0
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 3/143 (2%)
Frame = +1
Query: 79 AMVSGSNKPTTLSVYTTPKPSTRGPVLPSVILNNNRNTNTGSDSRSTSDTELQTLSEELL 258
A+ SG P+ K + P L S + ++ ++ S SRST TE +ELL
Sbjct: 754 ALPSGQQDPSIACEEEGSKSPHQVPGLMSALPKHHHHS--ASSSRSTDCTECNRSFQELL 811
Query: 259 RKDTNNAAKYITMDFQEKTTSQSKEDKAPLPLLNISSAAWNIPTIEKIVPLLDN-YERST 435
K + + K + E+ L N A N+ + +P L N ERS
Sbjct: 812 EKLNQSDNGPSKPKKKAKLPYLTSENNV---LKNELKATVNLTKVS--IPYLGNSTERSV 866
Query: 436 LV--NEHVTPQERNEENAFMDAI 498
L ++HV P + N+ ++ D +
Sbjct: 867 LSEGDKHVNPDQSNQRDSTSDLV 889
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 85 VSGSNKPTTLSVYTTPKPSTRGPVLPSVILNNNRNTNTGSDSRSTSDTELQTLSEELLR- 261
+S S PT S TTP+P + P PS N+N N T + +T+ ++ S ELL
Sbjct: 232 LSNSRNPTPFSNPTTPRPIS--PSSPSFSFNSNPNQKT--NWATTTPKSGRSSSAELLSP 287
Query: 262 --KDTNNAAKYITMD 300
NN++ I+ D
Sbjct: 288 FFAGNNNSSNTISPD 302
>SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2214
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 178 NNRNTNTGSDSRSTSDTELQTLSEELLRKDTNNAAKYITMDFQEKTTSQSK 330
NN N N S+S+ T+ T + T + T A K Q+KTT+ +K
Sbjct: 868 NNSNNNNSSNSKKTTTTVITTTATTATTTTTATAKK--QQQLQQKTTTTTK 916
>SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042)
Length = 4607
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +1
Query: 229 ELQTLSEELLRKDTNNAAKYITMDFQEKTTSQSKEDKAPLPLLNISSAAWNIPTIEKIVP 408
+LQ L + LL + + ++ +E T S K+ PLPL + S + W ++P
Sbjct: 3964 DLQALCK-LLCSNNEDVTNFLHCALKETTPSLLKDFGVPLPLGDASRSKWERGFAMALLP 4022
Query: 409 LLDNYE 426
+L+ ++
Sbjct: 4023 VLEKFQ 4028
>SB_37928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 339 SPVAAAKYIISGMEYSNNRKNCPTLGQLRK 428
SP +A ++ SG E+ N+R+N P+ +R+
Sbjct: 209 SPTSAELFVKSGTEFFNDRRNTPSYSSMRE 238
>SB_54044| Best HMM Match : PARP (HMM E-Value=0.078)
Length = 489
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +1
Query: 76 SAMVSGSNKPTTLSVYTTPKPSTRGPVLPSVILNNNRNTNTGSDSRSTSD 225
SA+ SG N+ + Y PST G L + I + NRN++ +D+ +TSD
Sbjct: 155 SAVSSGRNQRSGNHSY----PSTSGLQLYTSICHTNRNSHYSTDTTTTSD 200
>SB_24369| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 490 DAIMATSVMRHLMNFLKEKGYVTPDPRQQRDFVKQLWFSLYSRGK 624
+A+ V+ L+N +KEK YV DP Q + + L ++ K
Sbjct: 105 NALTEVCVLSDLLNVVKEKKYVVLDPVSQSQAISKPTLQLLAKKK 149
>SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018)
Length = 843
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 477 KCVYGRHHGHKCYEAFNEFFERKR 548
K +YG H GH C+E +E ER+R
Sbjct: 557 KKIYGAHKGHSCFEV-HEAEERER 579
>SB_11496| Best HMM Match : DUF408 (HMM E-Value=7.3e-07)
Length = 825
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 421 YERSTLVNEHVTPQERNEENAFMDAIMATSVMRHLMNFLKEKGYVTPDPR 570
Y R + ++ E +E N D + ++RH +KE+ TPDP+
Sbjct: 608 YYRQAGWSAYIGVVEGSEINQHSDERLLREMLRHRNKIIKERLETTPDPK 657
>SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/85 (21%), Positives = 38/85 (44%)
Frame = +1
Query: 88 SGSNKPTTLSVYTTPKPSTRGPVLPSVILNNNRNTNTGSDSRSTSDTELQTLSEELLRKD 267
S SN + S ++ S+ S N+N N+N+ S S S+S++ + S +
Sbjct: 129 SSSNSNSNSSSSSSSSSSSSSGSSSSSNSNSNSNSNSSSSSNSSSNSNSNSSSSSNSSSN 188
Query: 268 TNNAAKYITMDFQEKTTSQSKEDKA 342
+N+++ + +S+S +
Sbjct: 189 SNSSSNSSSSSNSSSNSSRSSSSSS 213
>SB_9823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1329
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 226 TELQTLSEELLRKDTNNAAKYITMDFQEKTTSQSKEDKAPLPLLNISSAAWNI 384
T L + + TN A+ +TM QSK PL L+ SS++ N+
Sbjct: 360 TRLNEQEKSTILTPTNTIAEIVTMPESNIEGDQSKSLSPPLSLIRASSSSVNL 412
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 27.9 bits (59), Expect = 9.6
Identities = 31/134 (23%), Positives = 49/134 (36%), Gaps = 4/134 (2%)
Frame = +1
Query: 94 SNKPTTLSVYTTPKPSTRGPVLPSVILNNNRNTNTGSDSRSTSDTELQTLSEELLRKDTN 273
+ +PTT TT PST+ P P + +T + ++ T+ T T ++ T
Sbjct: 248 TKQPTTTQQTTTTLPSTKQPTTPQLTTTTFPSTKQPTTTQQTTATLPSTKQPTTTQQTT- 306
Query: 274 NAAKYITMDFQEKTTSQSKEDKAPLPLLNISSAAWNIPTIEKIVP---LLDNYERSTLV- 441
A T + T S + P P + P + I D+ E L
Sbjct: 307 --ATLPTPSTKPTTVSPTTRQPPPEPTEPLEPTEPTEPPVLGIFEQKHFADSGEERKLAG 364
Query: 442 NEHVTPQERNEENA 483
E PQ+ + E A
Sbjct: 365 GEPAVPQDSSVEGA 378
>SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 163 SVILNNNRNTNTGSDSRSTSDTELQTLSEELLRKDTNN 276
++I NNN + N SD+ +TSD +S+ D NN
Sbjct: 220 NIIDNNNSDNNNTSDNNNTSDN--NNISDNNNTSDNNN 255
>SB_57716| Best HMM Match : Phage_fiber_2 (HMM E-Value=4.3)
Length = 189
Score = 27.9 bits (59), Expect = 9.6
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = +1
Query: 322 QSKEDKAPLPLLN---ISSAAWNIPTI--EKIVPLLDNYERSTLVNEHVTPQERNEENAF 486
Q+ EDKA L+ + S + P+ E PLL N R + + VTP +N+
Sbjct: 81 QTAEDKAKATKLSRRSVHSTSGKRPSTVAESKKPLLKNKNRRSCIAAPVTPSSSTSDNSK 140
Query: 487 MDAIMATSVMRHLMN 531
+ A M+ +N
Sbjct: 141 DTRLAAAKAMKRSIN 155
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/60 (23%), Positives = 25/60 (41%)
Frame = +1
Query: 166 VILNNNRNTNTGSDSRSTSDTELQTLSEELLRKDTNNAAKYITMDFQEKTTSQSKEDKAP 345
+++N ++NT G D +Q L L D A +T+D T+ + +P
Sbjct: 3256 ILINKHQNTLDGKDDSQAGQELVQALDNLLKELDQIRATLTVTIDVSGHVTTHLSSNFSP 3315
>SB_20796| Best HMM Match : RVT_1 (HMM E-Value=0.047)
Length = 660
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 175 NNNRNTNTGSDSRSTSDTELQTLSEELLRKDTNNAAKYITMDFQE 309
NNN N N ++S+ S T S+ L R+ + ++T+ +++
Sbjct: 162 NNNNNNNNNNNSKKASFTSCCRNSKLLKRRHPSKCVPFLTIRYKK 206
>SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 689
Score = 27.9 bits (59), Expect = 9.6
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 88 SGSNKPTTLSVYTTPKPSTRGPVLPSV-ILNNNRNTNTGSDSRSTSDTELQTLSEELLRK 264
S SN +T++V TT V S+ I N+N N+N+ S+S S S+ + S
Sbjct: 537 SNSNNNSTVTVTTT------ATVQYSISISNSNSNSNSNSNSNSNSNNNSNSNSNNNSNN 590
Query: 265 DTNN 276
+ NN
Sbjct: 591 NNNN 594
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.129 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,462,781
Number of Sequences: 59808
Number of extensions: 510653
Number of successful extensions: 2170
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2023
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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