Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0293
         (775 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    28   0.11 
AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...    25   0.78 
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   3.2  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   5.5  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   5.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.3  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   9.6  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    21   9.6  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +3

Query: 288 YHDGLSRKNDITVERRQSPVAAAKYIISGMEYSNNRKNCP 407
           +H+ L R N + V   Q P    KY   G+E      +CP
Sbjct: 345 FHEILKRANTLFVLTLQRPQDVDKYPAEGLEMKGQMVHCP 384


>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
           protein.
          Length = 134

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +3

Query: 270 KQCCQIYHDGLSRKNDITVERRQSPVAAAKYIISGMEYSNN 392
           K C +I H G S+K    VER Q       Y  + +    N
Sbjct: 93  KFCAEIAHGGSSKKRKSIVERAQQLSIRVTYASARLRSQEN 133


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 91  GSNKPTTLSVYTTPKPSTRGPVLPSVILNNNR 186
           G+N+P  +S    P P  R    P     NNR
Sbjct: 98  GNNRPVYISQPRPPHPRLRREAEPEAEPGNNR 129



 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 91  GSNKPTTLSVYTTPKPSTRGPVLPSVILNNNR 186
           G+N+P  +S    P P  R    P     NNR
Sbjct: 154 GNNRPVYISQPRPPHPRLRREAEPEAEPGNNR 185



 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +1

Query: 91  GSNKPTTLSVYTTPKPSTRGPVLPSVILNNNR 186
           G+N+P  +     P P  R    P     NNR
Sbjct: 238 GNNRPVYIPQPRPPHPRLRREAKPEAKPGNNR 269


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 519 PHNTCGHDGVHKRIFLVSFLWRY 451
           P  T    G+H++  L+S  W Y
Sbjct: 52  PAQTTSKAGIHRKKVLLSVWWDY 74


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 519 PHNTCGHDGVHKRIFLVSFLWRY 451
           P  T    G+H++  L+S  W Y
Sbjct: 174 PAQTTSKAGIHRKKVLLSVWWDY 196


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = +1

Query: 172 LNNNRNTNTGSDSRS-TSDTELQTLSEELLRKDTNNAAKYITMDFQEKTTSQSKEDKAPL 348
           +   R + T  +S    SD  L + SEE L++D  N    I+      ++S+  +   P 
Sbjct: 332 VEERRVSKTAMNSNQIVSDNSLSS-SEEKLKQDILNLRTDISSSSSSISSSEENDFWQPK 390

Query: 349 PLL 357
           P L
Sbjct: 391 PTL 393


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 14/63 (22%), Positives = 24/63 (38%)
 Frame = +3

Query: 369 SGMEYSNNRKNCPTLGQLRKKHVSK*TCNATGTKRGKCVYGRHHGHKCYEAFNEFFERKR 548
           +G    ++   CP L +L K  +S  T   +     K    R+H +      N   ++K 
Sbjct: 301 TGGPRKSHESQCPMLQKLEKPVLSSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSPHQKKL 360

Query: 549 LCH 557
             H
Sbjct: 361 RFH 363


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +1

Query: 91  GSNKPTTLSVYTTPKPSTRGPVLPSVILNNNR 186
           G+N+P  +     P P  R    P     NNR
Sbjct: 126 GNNRPVYIPQPRPPHPRLRREAKPEAEPGNNR 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.129    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,955
Number of Sequences: 438
Number of extensions: 5640
Number of successful extensions: 32
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)