Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0291
         (698 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0517 + 19000050-19000427,19000539-19000766,19001142-190012...    31   1.2  
07_01_0836 - 6795224-6795263,6796027-6796128,6796264-6796401,679...    29   2.7  
07_01_0482 + 3627980-3628270,3628785-3629012,3629116-3629237,362...    29   2.7  
02_05_0358 + 28264928-28266049                                         28   6.2  
02_04_0436 - 22920106-22920348,22920569-22920884,22929569-229300...    28   6.2  

>07_03_0517 +
           19000050-19000427,19000539-19000766,19001142-19001221,
           19001222-19001441,19001571-19001713,19002023-19002160,
           19002295-19002376
          Length = 422

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 309 KYPITEYQPVYFVANSFEDAQEKMIKFAQTIPRD 410
           K PITE+    +V + F+ AQ+K+I+  Q I  D
Sbjct: 274 KDPITEFLECLYVNHDFDGAQQKLIECEQVILND 307


>07_01_0836 -
           6795224-6795263,6796027-6796128,6796264-6796401,
           6796790-6796932,6797388-6797607,6798087-6798208,
           6798317-6798544,6798993-6799355
          Length = 451

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 309 KYPITEYQPVYFVANSFEDAQEKMIKFAQTIPRD 410
           K PITE+    +V   F+ AQ+K+I+  Q I  D
Sbjct: 283 KDPITEFLECLYVNYDFDGAQQKLIECEQVILND 316


>07_01_0482 +
           3627980-3628270,3628785-3629012,3629116-3629237,
           3629747-3629966,3630434-3630576,3631004-3631141,
           3631275-3631380
          Length = 415

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 309 KYPITEYQPVYFVANSFEDAQEKMIKFAQTIPRD 410
           K PITE+    FV   F+ AQ+K+I+  + I  D
Sbjct: 259 KDPITEFLECLFVNYDFDGAQQKLIECEEVILND 292


>02_05_0358 + 28264928-28266049
          Length = 373

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +1

Query: 280 SLTPSLPG-VPSIPSQNTSPSISLLTAL 360
           ++ PSLP   PS  S N SPS+ ++TAL
Sbjct: 20  TIPPSLPSPAPSSSSLNLSPSLLIITAL 47


>02_04_0436 -
           22920106-22920348,22920569-22920884,22929569-22930027,
           22930187-22930401,22930741-22930803,22930814-22930830,
           22931141-22931389,22931546-22931774,22932427-22932534,
           22932954-22933094,22933669-22933729,22933974-22934095,
           22934533-22934760,22934857-22935000
          Length = 864

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 264 KPELREFDPESTGGTKYPITEYQP 335
           K ELR+ +  S GG ++PI+E  P
Sbjct: 364 KLELRDVEGNSVGGVEFPISELDP 387


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,223,363
Number of Sequences: 37544
Number of extensions: 401373
Number of successful extensions: 1020
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)