Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0291
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...   225   2e-61

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score =  225 bits (551), Expect = 2e-61
 Identities = 108/178 (60%), Positives = 137/178 (76%), Gaps = 1/178 (0%)
 Frame = +3

Query: 6   PLYTPEPDVCHELLGHAPLFADPAFAQFSQEIGLASLGAPDDYIEKLATCFWFTVEFGLC 185
           P +TPEPD  HELLGH PL ADP+FAQFSQEIGLASLGA D+ IEKL+T +WFTVEFGLC
Sbjct: 328 PYHTPEPDCIHELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTIYWFTVEFGLC 387

Query: 186 RQEGQLKAYGAGLLSSFGELQYCL-SDKPELREFDPESTGGTKYPITEYQPVYFVANSFE 362
           ++   +KAYGAGLLS++GEL + L S K E R F+P+ST   KY   +YQP+YFVA+SFE
Sbjct: 388 KEGPDVKAYGAGLLSAYGELLHALTSGKCEHRPFEPKSTAVQKYQDQDYQPIYFVADSFE 447

Query: 363 DAQEKMIKFAQTIPRDFGVRYNPYTQSIDILDSARQIRVLMREVHQEMELLLNAMDKL 536
           DA+EK  ++  T+ R F VRY+PYTQ ++ILDS  ++  LM +V+ EM  L NA++KL
Sbjct: 448 DAKEKFRRWVSTMSRPFEVRYDPYTQRVEILDSVDRLDNLMAQVNTEMTHLTNAVNKL 505


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,835
Number of Sequences: 438
Number of extensions: 4107
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)