Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0290
         (826 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55A10 Cluster: PREDICTED: similar to Protein KI...    34   3.8  
UniRef50_UPI0000499BEE Cluster: Ras guanine nucleotide exchange ...    34   3.8  
UniRef50_Q6MTW2 Cluster: Hypothetical transmembrane protein; n=1...    34   5.0  
UniRef50_Q1DIM0 Cluster: Predicted protein; n=1; Coccidioides im...    33   6.6  
UniRef50_Q7RCE9 Cluster: Putative uncharacterized protein PY0583...    31   7.3  

>UniRef50_UPI0000D55A10 Cluster: PREDICTED: similar to Protein
           KIAA1404; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to Protein KIAA1404 - Tribolium castaneum
          Length = 1990

 Score = 34.3 bits (75), Expect = 3.8
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
 Frame = +1

Query: 382 DQGIVFFNKKIQLGDSKSFL*N---ILRHPFTNVTSTKELSKKLLMGTRSSLHRGM-RFF 549
           D GIV F K ++     +F+ N   +L+     V   K +    L+  +S L R   +FF
Sbjct: 97  DDGIVLFVKVLKKVSDSAFVENKYKVLQLYLDEVFVDKLVKYVALLPMQSDLDRTRNQFF 156

Query: 550 FTHSYEFWNSITSIC 594
           + ++ EFWN++  IC
Sbjct: 157 WENTDEFWNNVIGIC 171


>UniRef50_UPI0000499BEE Cluster: Ras guanine nucleotide exchange
           factor; n=1; Entamoeba histolytica HM-1:IMSS|Rep: Ras
           guanine nucleotide exchange factor - Entamoeba
           histolytica HM-1:IMSS
          Length = 1214

 Score = 34.3 bits (75), Expect = 3.8
 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
 Frame = -3

Query: 653 TKDAVYDFEDYKNVILGCISHIEVIEFQNSYEWVKKKRIPRC--NDDLVPINNFLLSSLV 480
           +K  +Y+F  + N    C S   ++++ N ++W  +KRI  C   ++ + I  FL+    
Sbjct: 274 SKIKLYEFFKWTNDKNACKSIQTLVKYYNGFQWYFQKRIVHCKTQEERLIIIKFLIDVAN 333

Query: 479 EVTFVNGCRNMFYRNDFESPSWIFLLKNTI 390
               +N   ++         S I+ LKNTI
Sbjct: 334 HCKILNNFDSLVCIMQIFLTSPIYRLKNTI 363


>UniRef50_Q6MTW2 Cluster: Hypothetical transmembrane protein; n=1;
           Mycoplasma mycoides subsp. mycoides SC|Rep: Hypothetical
           transmembrane protein - Mycoplasma mycoides subsp.
           mycoides SC
          Length = 339

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -3

Query: 590 IEVIEFQNSYEWVKKKRIPRCNDDLVPINNFLLSSLVEVTFVNGCRNM 447
           +E+I+  NS  W+ K  I     +LV I+NF L S  E+  +N C  +
Sbjct: 59  VELIKLSNSLFWIVKLAILFWFSELVLISNFNLLSFSELLLINVCNKL 106


>UniRef50_Q1DIM0 Cluster: Predicted protein; n=1; Coccidioides
           immitis|Rep: Predicted protein - Coccidioides immitis
          Length = 163

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +1

Query: 523 SLHRGMRFFFTHSYEFWNSITSICDMQPKITFL*SSKSYTASFVFNL 663
           S HRG R F+ ++Y  WN  TS+ D+     F+ +S +    F F L
Sbjct: 100 SSHRGKRLFYVNNYIDWNQYTSLYDLD----FMNTSTALVNKFSFKL 142


>UniRef50_Q7RCE9 Cluster: Putative uncharacterized protein PY05835;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY05835 - Plasmodium yoelii
           yoelii
          Length = 461

 Score = 31.1 bits (67), Expect(2) = 7.3
 Identities = 22/73 (30%), Positives = 34/73 (46%)
 Frame = +2

Query: 83  EISSFNEKEKKNI*SETKHYLFTVKNQKIITQNI*KQSNKNKLFGY**MSTRXXXXXXXX 262
           E+SS + KE +N   E K+YL T    K    NI +++ KN  + Y  +           
Sbjct: 308 EVSSKDSKENENKDPEYKNYLCTTNEPKYSYLNIVEKTKKN--YAYIFIQNILNYIFIEH 365

Query: 263 XRYTLPKHLLQNF 301
               +PK+ L+NF
Sbjct: 366 YFPIIPKYTLENF 378



 Score = 21.0 bits (42), Expect(2) = 7.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 284 HLLQNFFKLNKVVTMPSFLL 343
           +LL+ +FK NK+V +  F L
Sbjct: 402 NLLRIYFKKNKIVDINIFYL 421


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,956,254
Number of Sequences: 1657284
Number of extensions: 14227946
Number of successful extensions: 34363
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34354
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71324098314
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)