Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0290
         (826 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0120 - 6797954-6798970,6799466-6799951                           31   1.1  
07_01_0157 + 1109499-1111022                                           29   4.5  
06_03_0499 + 21461608-21463427,21463517-21463627,21463867-214641...    28   7.8  
03_06_0190 + 32219878-32220465,32220551-32220652,32220730-322207...    28   7.8  

>05_02_0120 - 6797954-6798970,6799466-6799951
          Length = 500

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +1

Query: 520 SSLHRGMRFFFTHSYEFWNSITSICDMQPKITFL*SSKSYTASFVFNLPLHIAMNSISGH 699
           S L  G   F  H YE   S+ ++  +Q K+TFL  S++ ++ F   L   I+ + +S  
Sbjct: 58  SLLANGPVEFIRHHYEKMGSVFTVSLLQQKVTFLVGSEA-SSHFYKGLDSEISQDEVSQF 116

Query: 700 TCVIF 714
           T   F
Sbjct: 117 TIPTF 121


>07_01_0157 + 1109499-1111022
          Length = 507

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = -3

Query: 626 DYKNVILGCISHIEVIEFQNSYE-WVKKKRIPRCNDDLVPINNFLLSSLVEVT 471
           +YK ++ G   H+  I   N+ E  V+ K I   ND+ VP+NNF L  +++++
Sbjct: 173 EYK-LVQGNNQHLFWIRPNNTAERGVEAKLIFVYNDESVPVNNFFLGMMLQLS 224


>06_03_0499 +
           21461608-21463427,21463517-21463627,21463867-21464143,
           21464265-21464353,21464508-21464595,21464698-21464907,
           21464985-21465110,21465429-21465620,21466532-21467188
          Length = 1189

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +2

Query: 275 LPKHLLQNFFKLNKVVTMPSFLLSLMPLGIFFKVGMIKGLCFLI 406
           LPK + + F ++  +  + + +LSL P+  F  V MI  L F++
Sbjct: 85  LPKAIFEQFRRVANLYFLLTAILSLTPVCPFSAVSMIAPLAFVV 128


>03_06_0190 +
           32219878-32220465,32220551-32220652,32220730-32220795,
           32220977-32221042,32221135-32221422,32222178-32222276,
           32222821-32222914,32223923-32223975
          Length = 451

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = +2

Query: 368 FKVGMIKGLCFLIRKSNSEIQN--HSYKTYYDTHLQMLLQPKN*AKNY*WEQGHHC 529
           F VG  + + FL    N ++ N  H Y  Y     Q L +P++    Y WE  HHC
Sbjct: 374 FNVGFAQRVVFLEIAENIDMMNRLHPYCCYQQQE-QQLGEPED----YVWEPYHHC 424


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,227,879
Number of Sequences: 37544
Number of extensions: 339763
Number of successful extensions: 657
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)