Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0290
         (826 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    27   0.53 
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   2.1  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   3.7  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   8.6  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   8.6  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 27.5 bits (58), Expect = 0.53
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -1

Query: 595  RILKLLNSKIRMSG*KR--NAYRDAMMTLFPLIIFCLVLWL 479
            R L+ L +  RM G +   NA   A+ ++F +++ CL+ WL
Sbjct: 1406 RALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWL 1446


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3

Query: 557 WVKKKRIPRCNDDLVPINNFLLSSLVEVTFVNGCRNM 447
           W+ + R       +VP+N FLL  L  V  V G R M
Sbjct: 775 WLHRVRDLNVVQKVVPLNTFLLPKLWFVASVCGARAM 811


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 737 DFVIPT*LKITHVCPLMEFMAIWRGRLKTKDAVYDFE 627
           D+V PT    TH+CP  +     +G L    A++D E
Sbjct: 409 DYVAPTPKAKTHICPTCKRPFRHKGNLIRHMAMHDPE 445


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 332 SFLLSLMPLGIFFKVGMIKGLCFLIRKSNSEIQ 430
           +FLL L  LGI   VGM   +  +IR    ++Q
Sbjct: 422 AFLLMLFVLGIGSNVGMATTIMTVIRDRFPQLQ 454


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 332 SFLLSLMPLGIFFKVGMIKGLCFLIRKSNSEIQ 430
           +FLL L  LGI   VGM   +  +IR    ++Q
Sbjct: 422 AFLLMLFVLGIGSNVGMATTIMTVIRDRFPQLQ 454


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,737
Number of Sequences: 2352
Number of extensions: 15244
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)