Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0290
         (826 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19158-5|CAJ76965.1|  237|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AL032618-2|CAA21485.1|  640|Caenorhabditis elegans Hypothetical ...    28   7.1  
AF016677-2|AAB66146.1|  292|Caenorhabditis elegans Hypothetical ...    28   7.1  
Z66512-2|CAA91323.1|  387|Caenorhabditis elegans Hypothetical pr...    28   9.3  
AC006617-5|AAF39775.1|  325|Caenorhabditis elegans Serpentine re...    28   9.3  

>Z19158-5|CAJ76965.1|  237|Caenorhabditis elegans Hypothetical
           protein T23G5.2b protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
 Frame = -1

Query: 826 DNCT----AQNKNWILFTSLVTIIISGFFNLKS 740
           +NCT    A+N+NW  F    ++ +  FF L+S
Sbjct: 110 ENCTYYVHAENENWTCFEQSASLDVKNFFGLES 142


>Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical
           protein T23G5.2a protein.
          Length = 719

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
 Frame = -1

Query: 826 DNCT----AQNKNWILFTSLVTIIISGFFNLKS 740
           +NCT    A+N+NW  F    ++ +  FF L+S
Sbjct: 110 ENCTYYVHAENENWTCFEQSASLDVKNFFGLES 142


>AL032618-2|CAA21485.1|  640|Caenorhabditis elegans Hypothetical
           protein Y42A5A.2 protein.
          Length = 640

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 19/44 (43%), Positives = 22/44 (50%)
 Frame = -3

Query: 533 RCNDDLVPINNFLLSSLVEVTFVNGCRNMFYRNDFESPSWIFLL 402
           R ND++     FL   LV  TF NG   M     F SP +IFLL
Sbjct: 2   RRNDNITSAQCFLRRHLVIPTFTNGMVKML----FISPCFIFLL 41


>AF016677-2|AAB66146.1|  292|Caenorhabditis elegans Hypothetical
           protein ZK1240.5 protein.
          Length = 292

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 584 VIEFQNSYEWVKKKRIPRCNDDLVPINNFLLSSLVEVT 471
           +I+FQN YEW K        +D  P+ N L+  + E T
Sbjct: 108 LIDFQN-YEWQKLSNCHFLTEDYCPLKNKLICRICEHT 144


>Z66512-2|CAA91323.1|  387|Caenorhabditis elegans Hypothetical
           protein F52H3.3 protein.
          Length = 387

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 501 IINGNKVIIASRYAFLFYPLIRILEFNNFNMRYATQ 608
           +IN  K+ +   Y  L+ P+   + F+NF  R  TQ
Sbjct: 233 VINKQKLFVNKAYLALYSPVFYAMFFSNFQEREKTQ 268


>AC006617-5|AAF39775.1|  325|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 65 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 717 LGRYYKVQLFKLKNPEIIIVTSDVKRIQF 803
           +G Y+K Q  KL  P +   TSD  R+ F
Sbjct: 204 IGSYWKHQAMKLLKPHVSPNTSDATRVMF 232


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,576,766
Number of Sequences: 27780
Number of extensions: 365184
Number of successful extensions: 978
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)