Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0289
         (780 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    60   8e-11
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   8.0  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 60.1 bits (139), Expect = 8e-11
 Identities = 25/34 (73%), Positives = 31/34 (91%), Gaps = 1/34 (2%)
 Frame = +1

Query: 100 LGHVFDDGPAPTRKRFCINSASLDFIPA-EERKD 198
           +GHVF+DGP PTRKR+CINSAS++F+PA  ERKD
Sbjct: 1   MGHVFEDGPPPTRKRYCINSASIEFMPAGSERKD 34


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +3

Query: 357 LTDIRTNIRTVAINV*LRRFQGNTNGSLQHCL 452
           +TD +  +R+ ++N+    FQG+T  +L  CL
Sbjct: 649 VTDGKVVLRSRSLNIRRGIFQGDTFSTLWFCL 680


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 776,863
Number of Sequences: 2352
Number of extensions: 16573
Number of successful extensions: 23
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)