Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0289
         (780 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23646-5|ABD94102.1|  145|Caenorhabditis elegans Hypothetical pr...    60   1e-09
L23646-4|AAA28039.1|  152|Caenorhabditis elegans Hypothetical pr...    60   1e-09
L12018-11|AAA65467.1|  348|Caenorhabditis elegans Hypothetical p...    29   4.9  
U53146-1|AAA96111.1|  348|Caenorhabditis elegans Hypothetical pr...    28   8.6  
AC024696-1|AAK84516.1|  348|Caenorhabditis elegans Hypothetical ...    28   8.6  

>L23646-5|ABD94102.1|  145|Caenorhabditis elegans Hypothetical
           protein F44E2.6b protein.
          Length = 145

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
 Frame = +1

Query: 43  DTSAGLVRTEVRCSKCAAHLGHVFDDGPAPTR-KRFCINSASLDFIPAEERKD 198
           D S G+ RTEVRC  C AHLGHVF+DGP  T  +R+CINS  + F    E+KD
Sbjct: 97  DRSHGMHRTEVRCKTCDAHLGHVFNDGPKETTGERYCINSVCMAF----EKKD 145


>L23646-4|AAA28039.1|  152|Caenorhabditis elegans Hypothetical
           protein F44E2.6 protein.
          Length = 152

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
 Frame = +1

Query: 43  DTSAGLVRTEVRCSKCAAHLGHVFDDGPAPTR-KRFCINSASLDFIPAEERKD 198
           D S G+ RTEVRC  C AHLGHVF+DGP  T  +R+CINS  + F    E+KD
Sbjct: 104 DRSHGMHRTEVRCKTCDAHLGHVFNDGPKETTGERYCINSVCMAF----EKKD 152


>L12018-11|AAA65467.1|  348|Caenorhabditis elegans Hypothetical
           protein F22B7.1 protein.
          Length = 348

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 527 TILAMLWLNTSTNVYNKKKINVC 459
           +I A LW N S  +Y KKK+N C
Sbjct: 190 SIWARLWENLSVWMYGKKKLNEC 212


>U53146-1|AAA96111.1|  348|Caenorhabditis elegans Hypothetical
           protein ZC411.1 protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 95  LIWATCLMTGQHPPENVF 148
           L W   L+TGQ PPE VF
Sbjct: 231 LAWMINLLTGQKPPETVF 248


>AC024696-1|AAK84516.1|  348|Caenorhabditis elegans Hypothetical
           protein F07B7.7 protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 95  LIWATCLMTGQHPPENVF 148
           L W   L+TGQ PPE VF
Sbjct: 231 LAWMINLLTGQKPPETVF 248


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,903,118
Number of Sequences: 27780
Number of extensions: 360053
Number of successful extensions: 928
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)