Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0289
         (780 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   3.2  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   4.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   5.6  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    22   7.4  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    22   7.4  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    22   7.4  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    22   7.4  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    22   7.4  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    22   7.4  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    22   7.4  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    22   7.4  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   7.4  

>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 14/63 (22%), Positives = 27/63 (42%)
 Frame = +2

Query: 32  HFTVILVQVWCEPRCVVPSAPLIWATCLMTGQHPPENVFV*IQHLWTSYPLKKGKINIFE 211
           H+ + L+ +      ++ +  +IW  C       P N+FV    +   + + K  I I+ 
Sbjct: 48  HYLLALLYILFTFLALLGNGLVIWIFCAAKSLRTPSNMFVVNLAICDFFMMIKTPIFIYN 107

Query: 212 SKN 220
           S N
Sbjct: 108 SFN 110


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 554 MTNFTPLCPTILAMLWLNTSTNVYNK 477
           +  FT +C T   M+ +N   N+Y +
Sbjct: 497 IVGFTEICSTATPMMVINMLQNLYEQ 522


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 585 ITCDIAYELINDQFYTTLPYYSR 517
           + CD+AY  +N+  +T  P+  R
Sbjct: 60  VVCDVAYNNVNNWLWT--PFIER 80


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 586 FINIRNALKQKYLLIHVKRKII 651
           FINI   LKQKY+      K+I
Sbjct: 340 FINILKFLKQKYVKNSKLEKVI 361


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
 Frame = -3

Query: 448 QCCKEPFV---FP*NLRNQTL 395
           QCC EP+V   F   +R +TL
Sbjct: 175 QCCPEPYVDVTFTIQIRRRTL 195


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
 Frame = -3

Query: 448 QCCKEPFV---FP*NLRNQTL 395
           QCC EP+V   F   +R +TL
Sbjct: 175 QCCPEPYVDVTFTIQIRRRTL 195


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
 Frame = -3

Query: 448 QCCKEPFV---FP*NLRNQTL 395
           QCC EP+V   F   +R +TL
Sbjct: 175 QCCPEPYVDVTFTIQIRRRTL 195


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
 Frame = -3

Query: 448 QCCKEPFV---FP*NLRNQTL 395
           QCC EP+V   F   +R +TL
Sbjct: 175 QCCPEPYVDVTFTIQIRRRTL 195


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
 Frame = -3

Query: 448 QCCKEPFV---FP*NLRNQTL 395
           QCC EP+V   F   +R +TL
Sbjct: 175 QCCPEPYVDVTFTIQIRRRTL 195


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
 Frame = -3

Query: 448 QCCKEPFV---FP*NLRNQTL 395
           QCC EP+V   F   +R +TL
Sbjct: 175 QCCPEPYVDVTFTIQIRRRTL 195


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
 Frame = -3

Query: 448 QCCKEPFV---FP*NLRNQTL 395
           QCC EP+V   F   +R +TL
Sbjct: 243 QCCPEPYVDVTFTIQIRRRTL 263


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
 Frame = -3

Query: 448 QCCKEPFV---FP*NLRNQTL 395
           QCC EP+V   F   +R +TL
Sbjct: 243 QCCPEPYVDVTFTIQIRRRTL 263


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 255 YYKVYVTF*SLSFLDSNILI 196
           YY  YV F SLS+L    +I
Sbjct: 462 YYSHYVAFKSLSYLKKQPVI 481


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,288
Number of Sequences: 438
Number of extensions: 4615
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)