Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0288
(541 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0591 - 4401847-4402063,4402860-4403002,4403339-4403447,440... 31 0.59
10_08_0251 - 16188603-16188944 29 3.1
04_04_1462 - 33769122-33769151,33769385-33769426,33769571-337701... 29 3.1
02_05_0681 + 30842038-30842301,30843067-30843300,30843409-308435... 29 3.1
11_06_0410 - 23223701-23223714,23223863-23225159,23225314-232262... 28 4.1
01_06_1572 + 38319544-38319849,38320427-38320513,38320584-383206... 28 4.1
09_04_0347 + 16887182-16888504 28 5.5
07_03_1126 - 24166758-24166879,24166948-24167386,24167708-241678... 28 5.5
09_04_0634 - 19132916-19134033,19134716-19135915,19136002-191361... 27 7.2
03_05_0371 + 23570246-23570359,23570499-23570575,23570600-235706... 27 7.2
12_02_0693 - 22207582-22207620,22208421-22208597,22209258-222093... 27 9.6
12_01_0123 + 941923-942648 27 9.6
09_06_0121 + 20975132-20975755,20976834-20976977,20977333-209774... 27 9.6
07_03_1462 + 26716197-26716484,26716618-26716746,26716963-267170... 27 9.6
>01_01_0591 -
4401847-4402063,4402860-4403002,4403339-4403447,
4403546-4404707,4405754-4405865,4405980-4406015
Length = 592
Score = 31.1 bits (67), Expect = 0.59
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 279 QNRSAQELWPEGKMKDSDN-KNRVKECNWSYENEVNVSDEKLREENTGNGIISRTIRRES 455
Q + + WP+ +K N K++ E N E++ + SD ++EN G R RR S
Sbjct: 7 QRKPGEASWPKVVLKKWLNLKSKDSEFNADEEDDDDGSDVDEQDENVEGGAPYRLRRRNS 66
Query: 456 ETASCEKDN 482
ET + N
Sbjct: 67 ETLRAQYIN 75
>10_08_0251 - 16188603-16188944
Length = 113
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 276 RWTPLIRCRYPN-RNDFRAVGGPDNEL*FRGK 184
RW PL RCR P R R G P E RG+
Sbjct: 76 RWVPLERCRRPRLRTPARGWGRPSGEPTTRGR 107
>04_04_1462 -
33769122-33769151,33769385-33769426,33769571-33770158,
33770398-33770508,33770585-33770625,33771238-33771382,
33771578-33771781,33772626-33772769,33772991-33773183,
33774559-33774602,33774694-33774822,33774907-33774954,
33775058-33775120,33775198-33775236,33776694-33776767,
33777460-33777518,33777709-33777768,33777920-33778044,
33778693-33778751,33779418-33779511,33779572-33779625,
33779775-33779813,33780423-33780602
Length = 854
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = +3
Query: 264 TESIYQNRSAQELW----PEGKMKDSDNKNRVKECNWSYEN 374
TE + R+ ++LW P G + +N +++KE NW++EN
Sbjct: 51 TEYFPEKRNLEDLWLSAFPVGT--EWENIDKIKEFNWNFEN 89
>02_05_0681 +
30842038-30842301,30843067-30843300,30843409-30843578,
30844130-30844474,30844475-30844661,30844747-30844798,
30844843-30845108,30845302-30845400,30845577-30846292,
30846616-30847098,30847288-30847546
Length = 1024
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 249 NGNESTESIYQNRSAQELWPEGKMKDSDNKNRVKE--CNWSYENEVNVSDEKLREENTGN 422
NG +T S +Q + W K+ SD + + E C+ SY+N+ + + E+TG
Sbjct: 580 NGAFNTLSGFQAADERNNWDYFKLLLSDKEPHMDELECDRSYQNDCDCVTLMISIEDTGV 639
Query: 423 GI 428
GI
Sbjct: 640 GI 641
>11_06_0410 -
23223701-23223714,23223863-23225159,23225314-23226225,
23226952-23227023,23227323-23227471,23227879-23227912
Length = 825
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 279 QNRSAQELWPEGKMKDSDNKN 341
+N++A+ +W EGKM DS KN
Sbjct: 505 RNQNARMVWSEGKMNDSMAKN 525
>01_06_1572 +
38319544-38319849,38320427-38320513,38320584-38320676,
38321491-38321567,38321974-38322562,38322701-38322794,
38322884-38322996,38323438-38323524,38323842-38323964,
38324058-38324192,38324437-38324484,38324993-38325094,
38325321-38325716
Length = 749
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 240 DLDNGNESTESIYQNRSAQELWPEGKMKD---SDNKNRVKECNWSYENEVNVSDEK 398
D D G +S + +Y + ELWPEG M + D NR KE S N+ V +E+
Sbjct: 571 DEDKGPQSRK-LYVELA--ELWPEGSMDNVGIKDAINRSKERRRSLYNQQKVRNEE 623
>09_04_0347 + 16887182-16888504
Length = 440
Score = 27.9 bits (59), Expect = 5.5
Identities = 23/86 (26%), Positives = 34/86 (39%)
Frame = +3
Query: 243 LDNGNESTESIYQNRSAQELWPEGKMKDSDNKNRVKECNWSYENEVNVSDEKLREENTGN 422
+ E S Y N A E E ++SD+ N +N+ +V TG
Sbjct: 289 MSTAGEGGGSGYDNADAGESEEEQYGRESDDDMESGRDNRHRKNQRSVPVTMANGNGTGI 348
Query: 423 GIISRTIRRESETASCEKDNDIKPAL 500
G ++ +R SE EK D+ P L
Sbjct: 349 GAVNAIVRGRSE---FEKGKDVYPYL 371
>07_03_1126 -
24166758-24166879,24166948-24167386,24167708-24167875,
24168388-24168675,24169468-24169575,24169759-24169811,
24170033-24170192,24170353-24170442,24170902-24170953,
24171156-24171283
Length = 535
Score = 27.9 bits (59), Expect = 5.5
Identities = 18/79 (22%), Positives = 33/79 (41%)
Frame = +3
Query: 180 VFFLGTRAHYQVLQRPENRFDLDNGNESTESIYQNRSAQELWPEGKMKDSDNKNRVKECN 359
+FF + L+RP + F L G+ + + + Q EG K++ + KE +
Sbjct: 270 IFFHIAIIGHLCLKRPRDVFQLTKGSPKQKDLLHRKKKQREGNEGGDKENKDAEANKEED 329
Query: 360 WSYENEVNVSDEKLREENT 416
E E K+++ T
Sbjct: 330 DEEEGEEEEEKAKVKKSKT 348
>09_04_0634 -
19132916-19134033,19134716-19135915,19136002-19136106,
19136273-19136315,19137622-19137740,19138074-19138172,
19138264-19138480
Length = 966
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 252 GNESTESIYQNRSAQELWPEGKMKDSDNKNRVKECNWSYENEVNVSDEKLREEN--TGNG 425
G+ + ES+ +N + E ++K ++ N + +C+ Y+ + D +L EN GN
Sbjct: 369 GSANAESVTENSRIDFVQTEDQLKLTNAVNTLTDCSSQYKCVKDTLDAQLPVENPFLGNS 428
Query: 426 IIS 434
+ S
Sbjct: 429 VCS 431
>03_05_0371 +
23570246-23570359,23570499-23570575,23570600-23570675,
23570761-23570892,23570945-23571412,23571513-23571590,
23571693-23571809
Length = 353
Score = 27.5 bits (58), Expect = 7.2
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 11/117 (9%)
Frame = +3
Query: 222 RPENRF--DLDNGNESTE---SIYQNRSAQELWPEGKMKDSDNKNRVKECNWSYENEVNV 386
RP R +LDN N+ + + + R A+E E + ++ + + + +E E E
Sbjct: 194 RPRRRLRTNLDNTNQIEDLERQLQEEREAREREREEREREKERERQEREQEKERECEERA 253
Query: 387 SDEKLREENTGNGIISRTIRRESETASCEKDNDIKPAL------LNIDPDSASSPKP 539
+ +E++ + R R + A +K + + AL LNID SAS P P
Sbjct: 254 RE---KEQDRKERELERKERELEKIAFEQKSSFFEVALRAIQLKLNIDLPSASGPPP 307
>12_02_0693 -
22207582-22207620,22208421-22208597,22209258-22209347,
22210215-22210280,22210473-22210570,22210669-22210789,
22210875-22212477,22213332-22213915
Length = 925
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 276 YQNRSAQELWPEGKMKDSDNKNRVKECNWSYENEVNVSDEKLREE 410
++NR QE E + D++ R ++ E E+ +EK RE+
Sbjct: 500 HRNREQQEQDDEARFNTQDHEERDRQERLEREREMRQREEKEREQ 544
>12_01_0123 + 941923-942648
Length = 241
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 516 LDRCSTGQA*YRCPFHKKPSRSRVVLCD 433
LD+C +A + PF K +RS ++CD
Sbjct: 26 LDKCVNEEASVQSPFENKDTRSLGMVCD 53
>09_06_0121 +
20975132-20975755,20976834-20976977,20977333-20977457,
20978090-20978194,20978755-20978989
Length = 410
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 142 DN*DKCLQEAVELYFSSELELIIRSSNGPKIVSIW 246
D+ D C E ++ ++ LE ++ SS K V IW
Sbjct: 295 DSHDSCRGEVFQVEWNPNLETVLASSAADKRVMIW 329
>07_03_1462 +
26716197-26716484,26716618-26716746,26716963-26717055,
26717581-26717721,26718021-26718089,26718207-26718290,
26718784-26718964,26719055-26719171,26719245-26719303,
26719595-26719729,26719865-26720014,26720170-26720208
Length = 494
Score = 27.1 bits (57), Expect = 9.6
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 13/79 (16%)
Frame = +3
Query: 219 QRPENRFDLDNGNESTESIYQNRSAQELWPE--GKMKDSDNKNRVKECN----------- 359
+R R ++DN + + + Q QE+ P+ GK + + K + +E
Sbjct: 182 ERSNARIEIDNARAAVQKVEQLVKEQEIDPQINGKQDEDELKEKAQEARRVKMLHCPSKA 241
Query: 360 WSYENEVNVSDEKLREENT 416
ENE+ V E+L E+++
Sbjct: 242 MDIENEIEVLREQLAEKSS 260
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,034,329
Number of Sequences: 37544
Number of extensions: 288188
Number of successful extensions: 798
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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