Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0288
(541 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 0.93
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 29 1.6
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 29 1.6
U97403-2|AAB52472.2| 649|Caenorhabditis elegans Hypothetical pr... 29 2.1
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 29 2.8
U28993-8|AAK31496.1| 632|Caenorhabditis elegans C.elegans homeo... 28 3.7
U28993-7|AAL27244.1| 641|Caenorhabditis elegans C.elegans homeo... 28 3.7
Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p... 28 4.9
U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like ... 28 4.9
U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like ... 28 4.9
AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical ... 28 4.9
AF097737-1|AAD16170.1| 982|Caenorhabditis elegans hunchback-rel... 28 4.9
AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical ... 28 4.9
Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z73969-4|CAA98235.2| 428|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-relat... 27 6.5
AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase prote... 27 6.5
Z98866-14|CAB11553.1| 524|Caenorhabditis elegans Hypothetical p... 27 8.6
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 0.93
Identities = 22/104 (21%), Positives = 41/104 (39%)
Frame = +3
Query: 228 ENRFDLDNGNESTESIYQNRSAQELWPEGKMKDSDNKNRVKECNWSYENEVNVSDEKLRE 407
EN D D G++ E + + +E ++ + K+ E ++E +
Sbjct: 107 ENDSDEDVGDDGKEEEMKKKKEKEEEERRAKEERKKAKKEKQRQKELEERNRKAEEAASK 166
Query: 408 ENTGNGIISRTIRRESETASCEKDNDIKPALLNIDPDSASSPKP 539
+ +R+ + S + D+D KPALL SS +P
Sbjct: 167 RRKREAEVEAERKRKRKEISVDSDDDDKPALLEKRNRRDSSTQP 210
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +3
Query: 210 QVLQRPENRFDLDNGNESTESIYQNRSAQELWPEGKMKDSDNKNRVKECNWSYENE---V 380
++L+ E R+ N S SIYQ S++ +PE + N E +YE E
Sbjct: 927 KLLEETERRYAHYNSRASNPSIYQ--SSRYYYPERHGQPQHTDNTRAESVVAYERESRRE 984
Query: 381 NVSDEKLREENTGNGIISRTIRRESE 458
+ +D+ + + ++ R IR E+E
Sbjct: 985 SPADQAHIRSRSADYLMDRRIREETE 1010
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +3
Query: 210 QVLQRPENRFDLDNGNESTESIYQNRSAQELWPEGKMKDSDNKNRVKECNWSYENE---V 380
++L+ E R+ N S SIYQ S++ +PE + N E +YE E
Sbjct: 927 KLLEETERRYAHYNSRASNPSIYQ--SSRYYYPERHGQPQHTDNTRAESVVAYERESRRE 984
Query: 381 NVSDEKLREENTGNGIISRTIRRESE 458
+ +D+ + + ++ R IR E+E
Sbjct: 985 SPADQAHIRSRSADYLMDRRIREETE 1010
>U97403-2|AAB52472.2| 649|Caenorhabditis elegans Hypothetical
protein T10E9.4 protein.
Length = 649
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 315 KMKDSDNKNRVKECNWSYE-NEVNVSDEKLREENTGNGIISRTIRRESETASCEKDNDIK 491
K K ++ +VK C + E + N D + + R+ +ES C K D+K
Sbjct: 165 KSKANNQSYKVKTCTTNSECGDGNFCDSVYNPTFKNHRFLDRSGPKESSLQFCYKQPDLK 224
Query: 492 PALLNIDPD 518
P L ++ D
Sbjct: 225 PDLKHVKVD 233
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 28.7 bits (61), Expect = 2.8
Identities = 20/97 (20%), Positives = 43/97 (44%)
Frame = +3
Query: 234 RFDLDNGNESTESIYQNRSAQELWPEGKMKDSDNKNRVKECNWSYENEVNVSDEKLREEN 413
+F G + E+ + ++ +E GK ++D K + E + ++ + R +
Sbjct: 93 KFVCTTGRPNGEAYVEFKNTEEA---GKAMENDRKEISNRYIEVFTVEADEAEFEFRPDP 149
Query: 414 TGNGIISRTIRRESETASCEKDNDIKPALLNIDPDSA 524
NG ++ IR SC K++D++ ++P A
Sbjct: 150 DSNGEVNHVIRLRGVPWSC-KEDDVRKFFEGLEPPPA 185
>U28993-8|AAK31496.1| 632|Caenorhabditis elegans C.elegans homeobox
protein 38,isoform a protein.
Length = 632
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +3
Query: 321 KDSDNKNRVKECNWSYENEVNVSDEKLREENTGNGIISRTIRRE 452
+D + + + + +YE +V + DE+ +E NG I T + E
Sbjct: 563 EDDEELDELNDSELAYEEDVEIGDEEEEDEEQANGDILPTPKVE 606
>U28993-7|AAL27244.1| 641|Caenorhabditis elegans C.elegans homeobox
protein 38,isoform b protein.
Length = 641
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +3
Query: 321 KDSDNKNRVKECNWSYENEVNVSDEKLREENTGNGIISRTIRRE 452
+D + + + + +YE +V + DE+ +E NG I T + E
Sbjct: 572 EDDEELDELNDSELAYEEDVEIGDEEEEDEEQANGDILPTPKVE 615
>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
protein F44D12.1 protein.
Length = 1034
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 165 GGSGAVFFLGTRAHYQVLQRPENRFDLDNGNESTESIYQNRSAQ 296
G ++ G+ H R ++ L GN +ES+ NRS+Q
Sbjct: 625 GSDFSISTTGSAMHSYAEGRSNKKYHLPRGNHHSESLLVNRSSQ 668
>U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform b protein.
Length = 960
Score = 27.9 bits (59), Expect = 4.9
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = +3
Query: 252 GNESTESIYQNRSAQELWPEG---KMKDSDNKNRVKECNWSYENEVNVSDEKLREENTGN 422
GN S + + +++ P+G K+ K+ ++ + S++ + ++T +
Sbjct: 54 GNSSLTMLTAQQPGEKIHPDGGYVSPKEDGRKSSEHTNSYDVSASQSPSNDGAQSDSTSD 113
Query: 423 GIISRTIRRESETASCEKDNDIKP---ALLNIDPDSASSPK 536
I E+E + EKD+ IKP A ++ S S P+
Sbjct: 114 EHIDVECMTETEMDTDEKDSTIKPEDQATPKLEEGSDSKPE 154
>U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform a protein.
Length = 982
Score = 27.9 bits (59), Expect = 4.9
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = +3
Query: 252 GNESTESIYQNRSAQELWPEG---KMKDSDNKNRVKECNWSYENEVNVSDEKLREENTGN 422
GN S + + +++ P+G K+ K+ ++ + S++ + ++T +
Sbjct: 76 GNSSLTMLTAQQPGEKIHPDGGYVSPKEDGRKSSEHTNSYDVSASQSPSNDGAQSDSTSD 135
Query: 423 GIISRTIRRESETASCEKDNDIKP---ALLNIDPDSASSPK 536
I E+E + EKD+ IKP A ++ S S P+
Sbjct: 136 EHIDVECMTETEMDTDEKDSTIKPEDQATPKLEEGSDSKPE 176
>AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical
protein F19B2.6 protein.
Length = 807
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +3
Query: 192 GTRAHYQVLQRPENRFDLDNGNESTESIYQNRSAQELWP---EG-KMKDSDNKNRV-KEC 356
G + YQ +PE FD +NGN++ + + ++P EG ++DN + +
Sbjct: 475 GMQGSYQQNNQPELLFDSNNGNQTVNNAPNGNYQEPVYPLLQEGPTWNNNDNHDYFPSDD 534
Query: 357 NWSYENEVNVSDEKLREE 410
+ S ++ VS E +R++
Sbjct: 535 SMSQTSQEPVSVESIRKK 552
>AF097737-1|AAD16170.1| 982|Caenorhabditis elegans
hunchback-related protein protein.
Length = 982
Score = 27.9 bits (59), Expect = 4.9
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = +3
Query: 252 GNESTESIYQNRSAQELWPEG---KMKDSDNKNRVKECNWSYENEVNVSDEKLREENTGN 422
GN S + + +++ P+G K+ K+ ++ + S++ + ++T +
Sbjct: 76 GNSSLTMLTAQQPGEKIHPDGGYVSPKEDGRKSSEHTNSYDVSASQSPSNDGAQSDSTSD 135
Query: 423 GIISRTIRRESETASCEKDNDIKP---ALLNIDPDSASSPK 536
I E+E + EKD+ IKP A ++ S S P+
Sbjct: 136 EHIDVECMTETEMDTDEKDSTIKPEDQATPKLEEGSDSKPE 176
>AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical
protein K06A5.4 protein.
Length = 877
Score = 27.9 bits (59), Expect = 4.9
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 204 HYQVLQ-RPENRFDLDNGNESTESIYQ-NRSAQELWPEGKMKDSDNKNRVKECNWSYENE 377
H ++Q RP +R L + S Y+ N++ +G K NR + ENE
Sbjct: 804 HLSMMQARPSSR--LKKSSSMNNSTYRGNKNTSISLEKGTQKALKIINRGTTIHEDDENE 861
Query: 378 VNVSDEKLREENT 416
N D+ +REE+T
Sbjct: 862 DNDDDDDMREEDT 874
>Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical protein
D2005.4 protein.
Length = 1188
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 384 VSDEKLREENTGNGIISRTIRRESETASCEKDNDIKPALLNI-DPDS 521
+S+E L+EE+TG+ + + +SETA D+ I + DPD+
Sbjct: 920 ISEEVLKEESTGDCVKTSKDHMDSETAGNCSDSVINDEPVEAEDPDN 966
>Z73969-4|CAA98235.2| 428|Caenorhabditis elegans Hypothetical
protein C12D8.5 protein.
Length = 428
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 377 FVFVAPIAFFNAILVVRILHLTLRP 303
F+ PI+ IL+V ++H+TL+P
Sbjct: 9 FLTAHPISVVTTILIVYLIHITLKP 33
>AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-related
protein 2A protein.
Length = 826
Score = 27.5 bits (58), Expect = 6.5
Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Frame = +3
Query: 267 ESIYQNRSAQELW---PEGKMKDSDNKNRVKECNWSYENEVNVSDEKLREENTGNGIISR 437
E I Q +E W + K ++ KNR +E W+ E+ N ++ I
Sbjct: 391 EKIEQREREEEEWRRKAKEKFEEEAAKNRARERKWAEEHGFNRPIRTRSQKYAEQDRIRY 450
Query: 438 TIRRESETASCEKDNDIKPALLNIDPDSASSPK 536
++ + S E+ N+ + D D +P+
Sbjct: 451 ARKKAALEQSNEQSNESTDDAVESDSDDVPAPQ 483
>AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase protein
2 protein.
Length = 826
Score = 27.5 bits (58), Expect = 6.5
Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Frame = +3
Query: 267 ESIYQNRSAQELW---PEGKMKDSDNKNRVKECNWSYENEVNVSDEKLREENTGNGIISR 437
E I Q +E W + K ++ KNR +E W+ E+ N ++ I
Sbjct: 391 EKIEQREREEEEWRRKAKEKFEEEAAKNRARERKWAEEHGFNRPIRTRSQKYAEQDRIRY 450
Query: 438 TIRRESETASCEKDNDIKPALLNIDPDSASSPK 536
++ + S E+ N+ + D D +P+
Sbjct: 451 ARKKAALEQSNEQSNESTDDAVESDSDDVPAPQ 483
>Z98866-14|CAB11553.1| 524|Caenorhabditis elegans Hypothetical
protein Y49E10.17 protein.
Length = 524
Score = 27.1 bits (57), Expect = 8.6
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
Frame = +3
Query: 255 NESTESIYQNRSAQELWPEGKMKDSDNKNRVKECNWS--YENEVNVSDEKLREENTGNGI 428
+ STE +Y RSA++L E K S + S + S+ R + NG
Sbjct: 59 DNSTEMLYSRRSAEDLRSEQSSKTSSSTVSCTSLGSSNISSSSRQPSNGSFRSSGSSNG- 117
Query: 429 ISRTIRRESETASCEKDNDIKPALLNIDPDSASS 530
S + RR S +S + + NI S S
Sbjct: 118 SSSSSRRSSNGSSSSSGSTSDNSSSNISSSSRRS 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,122,138
Number of Sequences: 27780
Number of extensions: 251770
Number of successful extensions: 736
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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